Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
LINC01006Q8NI28 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
LINC01006Q8NI28 AC025166.1-201ENST00000612411 163 ntBASIC0.41□□□□□ -2.34
LINC01006Q8NI28 RNA5SP457-201ENST00000363657 124 ntBASIC0.4□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.218-201ENST00000364218 104 ntBASIC0.4□□□□□ -2.35
LINC01006Q8NI28 RNA5SP121-201ENST00000516537 101 ntBASIC0.4□□□□□ -2.35
LINC01006Q8NI28 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
LINC01006Q8NI28 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01006Q8NI28 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
LINC01006Q8NI28 MTND5P18-201ENST00000445624 1801 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 SNORD115-19-201ENST00000363098 82 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 SNORD115-18-201ENST00000363293 82 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 SNORD115-17-201ENST00000364612 82 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 SNORD115-35-201ENST00000365122 82 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 RNA5SP330-201ENST00000517096 96 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 MIR376B-201ENST00000614515 100 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 uc_338.17-201ENST00000619633 179 ntBASIC0.39□□□□□ -2.35
LINC01006Q8NI28 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.115-201ENST00000363272 98 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 RNU6-704P-201ENST00000364162 103 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.344-201ENST00000365381 112 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 MIR539-201ENST00000365690 78 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 MIR34C-201ENST00000384831 77 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 MIR548D2-201ENST00000384955 97 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 RNU6-521P-201ENST00000516663 105 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 AP001362.1-201ENST00000625165 124 ntBASIC0.38□□□□□ -2.35
LINC01006Q8NI28 AL157777.2-201ENST00000258070 137 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 MIR101-2-201ENST00000362195 79 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 MIR330-201ENST00000362196 94 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.127-201ENST00000363386 109 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 RNU6-865P-201ENST00000364772 107 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.328-201ENST00000365208 113 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SNORD50.2-201ENST00000365465 70 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SNORA7.5-201ENST00000410672 110 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 RNU6-733P-201ENST00000410759 104 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
LINC01006Q8NI28 BX276092.1-201ENST00000427368 251 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SUMO1P3-201ENST00000439961 304 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
LINC01006Q8NI28 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
LINC01006Q8NI28 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.30-201ENST00000362572 97 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.71-201ENST00000362892 104 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.98-201ENST00000363109 102 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 RNU6-80P-201ENST00000384195 107 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 RNU6-429P-201ENST00000384582 108 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 MIR759-201ENST00000390224 91 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 AL353813.1-201ENST00000440700 253 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 AL157398.1-201ENST00000452981 186 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 SNORD33.1-201ENST00000516213 88 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.174-201ENST00000363781 105 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 SNORA8.2-201ENST00000384372 139 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 MIR548M-201ENST00000408260 86 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01006Q8NI28 RNU6-659P-201ENST00000516454 104 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 AL035470.1-201ENST00000622571 220 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 MIR3914-2-201ENST00000637339 95 ntBASIC0.35□□□□□ -2.35
LINC01006Q8NI28 Y_RNA.56-201ENST00000362798 112 ntBASIC0.34□□□□□ -2.36
LINC01006Q8NI28 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.362-201ENST00000365518 110 ntBASIC0.34□□□□□ -2.36
LINC01006Q8NI28 TRAJ51-201ENST00000504127 63 ntBASIC0.34□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.712-201ENST00000517011 92 ntBASIC0.34□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.346-201ENST00000365385 112 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.360-201ENST00000365512 102 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 RNU6-716P-201ENST00000365621 103 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 AL109933.3-201ENST00000619095 188 ntBASIC0.33□□□□□ -2.36
LINC01006Q8NI28 SNORD115-24-201ENST00000363528 82 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 RNY4P6-201ENST00000363667 96 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.247-201ENST00000364500 92 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORD116-14-201ENST00000383894 92 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORD116-17-201ENST00000383929 92 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORD116-15-201ENST00000384445 92 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 Y_RNA.549-201ENST00000384657 102 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORD28-201ENST00000384706 75 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORD116-19-201ENST00000384729 92 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 SNRPGP12-201ENST00000449481 213 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 RNU6-1006P-201ENST00000516998 103 ntBASIC0.32□□□□□ -2.36
LINC01006Q8NI28 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms