Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-519P-201ENST00000410590 108 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 RNU7-85P-201ENST00000458851 63 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 SNORD4B-201ENST00000459083 72 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 AC048334.1-201ENST00000477975 159 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
NUP43Q8NFH3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.64□□□□□ -2.15
NUP43Q8NFH3 MIR519C-201ENST00000385053 87 ntBASIC1.64□□□□□ -2.15
NUP43Q8NFH3 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
NUP43Q8NFH3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
NUP43Q8NFH3 SNORD36A-201ENST00000362874 73 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 RNU4-58P-201ENST00000363192 141 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 MIR516A2-201ENST00000384888 90 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 MIR516A1-201ENST00000385033 90 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 MIR518E-201ENST00000385252 88 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NUP43Q8NFH3 RNU7-185P-201ENST00000459215 60 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 AC036111.3-201ENST00000526389 112 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 AC023934.1-201ENST00000574529 2389 ntBASIC1.62□□□□□ -2.15
NUP43Q8NFH3 RNU6-403P-201ENST00000363163 104 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 SNORA25.9-201ENST00000365087 128 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 RNU6-53P-201ENST00000365367 106 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 RNU6-652P-201ENST00000365488 107 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 SNORD83.1-201ENST00000411362 77 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 RNU6-857P-201ENST00000515893 110 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 SNORA31.2-201ENST00000516019 134 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 RN7SKP88-201ENST00000516847 250 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 7SK.8-201ENST00000612110 250 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 7SK.11-201ENST00000615477 250 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 7SK.13-201ENST00000622040 250 ntBASIC1.61□□□□□ -2.15
NUP43Q8NFH3 SNORD113.3-201ENST00000364630 78 ntBASIC1.6□□□□□ -2.15
NUP43Q8NFH3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.6□□□□□ -2.15
NUP43Q8NFH3 SNORA72.6-201ENST00000384520 129 ntBASIC1.6□□□□□ -2.15
NUP43Q8NFH3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.6□□□□□ -2.15
NUP43Q8NFH3 AC093729.1-201ENST00000513074 128 ntBASIC1.6□□□□□ -2.15
NUP43Q8NFH3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.6□□□□□ -2.15
NUP43Q8NFH3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP43Q8NFH3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
NUP43Q8NFH3 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 MIR1257-201ENST00000408490 117 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.59□□□□□ -2.15
NUP43Q8NFH3 snoU13.11-201ENST00000459219 104 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU7-106P-201ENST00000459514 67 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU7-153P-201ENST00000516455 62 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 AC140658.3-201ENST00000567603 271 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
NUP43Q8NFH3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
NUP43Q8NFH3 RNU4-32P-201ENST00000363404 141 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 SNORD100-201ENST00000408573 76 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 SNORD63B-201ENST00000411005 70 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
NUP43Q8NFH3 AC015818.7-201ENST00000428754 109 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 AC013244.2-201ENST00000603396 103 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 MIR8070-201ENST00000616510 88 ntBASIC1.58□□□□□ -2.16
NUP43Q8NFH3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NUP43Q8NFH3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
NUP43Q8NFH3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 RNU6-934P-201ENST00000365154 107 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 MIR1236-201ENST00000408340 102 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 TRMT112P2-201ENST00000512910 132 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 AC012493.3-201ENST00000604494 112 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 MIR6082-201ENST00000613604 109 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 AC106800.4-201ENST00000614905 153 ntBASIC1.57□□□□□ -2.16
NUP43Q8NFH3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NUP43Q8NFH3 RNU6-243P-201ENST00000391140 107 ntBASIC1.56□□□□□ -2.16
NUP43Q8NFH3 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
NUP43Q8NFH3 RNU6-75P-201ENST00000515944 104 ntBASIC1.56□□□□□ -2.16
NUP43Q8NFH3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 SNORD115-37-201ENST00000363768 82 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 RNU7-21P-201ENST00000459430 62 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 snoU13.18-201ENST00000459483 104 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
NUP43Q8NFH3 TRAJ51-201ENST00000504127 63 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 MIR4771-2-201ENST00000577758 74 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 MIR4771-1-201ENST00000582617 74 ntBASIC1.55□□□□□ -2.16
NUP43Q8NFH3 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms