Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR6129-201ENST00000616087 109 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AP001362.1-201ENST00000625165 124 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR3974-201ENST00000637126 96 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNY1P6-201ENST00000384193 109 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR5690-201ENST00000583739 73 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AL606534.2-204ENST00000635008 178 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR147A-201ENST00000385079 72 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-576P-201ENST00000390854 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU2-16P-201ENST00000410712 136 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AL442663.2-201ENST00000554385 511 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC245505.1-201ENST00000556398 224 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC025253.1-201ENST00000613623 543 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-509P-201ENST00000363519 107 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 PART1_1.1-201ENST00000611761 217 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 U4.5-201ENST00000617137 123 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC021613.1-201ENST00000623880 111 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 SNORD38.1-201ENST00000363863 68 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-309P-201ENST00000364573 106 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 SNORD101-201ENST00000384027 73 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-540P-201ENST00000384622 101 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNA5SP236-201ENST00000516169 116 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-506P-201ENST00000516553 94 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-706P-201ENST00000517229 104 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR519A1-201ENST00000385257 85 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MTND3P8-201ENST00000412909 339 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-803P-201ENST00000516034 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 SNORD116.3-201ENST00000517176 78 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC021443.1-201ENST00000604478 211 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR29B1-201ENST00000385015 81 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-466P-201ENST00000391224 103 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-983P-201ENST00000516004 103 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR1277-201ENST00000408536 78 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-211P-201ENST00000384047 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-980P-201ENST00000516925 103 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 MIR4272-201ENST00000635924 64 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 MIR519E-201ENST00000385075 84 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-308P-201ENST00000390957 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU4-43P-201ENST00000410628 137 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 SNRPGP8-201ENST00000454064 226 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU7-113P-201ENST00000459273 62 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 TRDV1-202ENST00000621643 102 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-484P-201ENST00000384016 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 U3.27-201ENST00000391237 200 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 AF228730.3-201ENST00000436691 102 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 AC090971.5-201ENST00000621102 293 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 MIR382-201ENST00000637119 76 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 MIR527-201ENST00000385244 85 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 SNORD38.3-201ENST00000516599 73 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-938P-201ENST00000411285 103 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 AC093423.1-201ENST00000440817 142 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 SCARNA18B-201ENST00000458806 135 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU7-188P-201ENST00000517063 64 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 MIR5704-201ENST00000584029 77 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 RNU6-90P-201ENST00000606352 106 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms