Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
CPEB3Q8NE35 AL513043.2-201ENST00000573941 143 ntBASIC1.29□□□□□ -2.2
CPEB3Q8NE35 AC025521.1-201ENST00000621624 286 ntBASIC1.29□□□□□ -2.2
CPEB3Q8NE35 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 Y_RNA.338-201ENST00000365320 114 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 MIR1257-201ENST00000408490 117 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 AL603825.1-201ENST00000438481 80 ntBASIC1.28□□□□□ -2.2
CPEB3Q8NE35 MIR494-201ENST00000349529 81 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU6-403P-201ENST00000363163 104 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU4-58P-201ENST00000363192 141 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU6-219P-201ENST00000364728 107 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU6-675P-201ENST00000384236 104 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 SNORD116-22-201ENST00000384430 92 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU6-402P-201ENST00000410678 103 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 MIR4771-2-201ENST00000577758 74 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 MIR4771-1-201ENST00000582617 74 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.27□□□□□ -2.21
CPEB3Q8NE35 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
CPEB3Q8NE35 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CPEB3Q8NE35 ZNF209P-201ENST00000593450 2304 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 RNU6-820P-201ENST00000384273 107 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 SNORA72.6-201ENST00000384520 129 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 RNU6-267P-201ENST00000516714 103 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 MIR4668-201ENST00000582284 70 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 MIR8066-201ENST00000617280 78 ntBASIC1.26□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.13-201ENST00000362403 112 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.57-201ENST00000362806 113 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 MIR125B2-201ENST00000385128 89 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.620-201ENST00000411009 88 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 RPS26P5-201ENST00000418544 335 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 MIR6082-201ENST00000613604 109 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
CPEB3Q8NE35 RNU6-1152P-201ENST00000384576 107 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 SNORD12-201ENST00000391002 90 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.609-201ENST00000410669 89 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 RNU6-592P-201ENST00000411333 103 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 RNU6-1194P-201ENST00000516208 104 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 AC013244.2-201ENST00000603396 103 ntBASIC1.24□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.42-201ENST00000362660 108 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 RNU6-497P-201ENST00000365316 104 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 RNY1P4-201ENST00000384595 115 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 SNORD100-201ENST00000408573 76 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
CPEB3Q8NE35 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CPEB3Q8NE35 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 Y_RNA.73-201ENST00000362910 113 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 RNY1P1-201ENST00000364372 112 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 RNA5SP173-201ENST00000364857 136 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 MIR516A2-201ENST00000384888 90 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 MIR516A1-201ENST00000385033 90 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 IGLL4P-201ENST00000614590 133 ntBASIC1.22□□□□□ -2.21
CPEB3Q8NE35 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPEB3Q8NE35 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
CPEB3Q8NE35 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CPEB3Q8NE35 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CPEB3Q8NE35 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 RNU7-156P-201ENST00000517214 74 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
CPEB3Q8NE35 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CPEB3Q8NE35 SNORD36A-201ENST00000362874 73 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 SNORD63B-201ENST00000411005 70 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 AL161932.1-201ENST00000437408 146 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 AC022137.1-201ENST00000483735 151 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
CPEB3Q8NE35 RNU6-633P-201ENST00000362612 103 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.56-201ENST00000362798 112 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 RNU6-573P-201ENST00000383938 106 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 RNU6-1254P-201ENST00000391266 104 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 MIR938-201ENST00000401216 83 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 TRAJ51-201ENST00000504127 63 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 RNU6-1053P-201ENST00000515930 101 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
CPEB3Q8NE35 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms