Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 AC133485.1-201ENST00000567176 124 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-86P-201ENST00000606534 107 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.190-201ENST00000363964 101 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 SNORD58A-201ENST00000383875 65 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 MIR520E-201ENST00000384867 87 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 SNRPGP12-201ENST00000449481 213 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 AC048334.1-201ENST00000477975 159 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 MIR4422-201ENST00000581938 83 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 AC103810.7-201ENST00000607821 91 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.37□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.17-201ENST00000362433 111 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORD116-10-201ENST00000363791 102 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-675P-201ENST00000384236 104 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORA2B-201ENST00000384583 137 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORA26.2-201ENST00000390922 122 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORA75.2-201ENST00000391138 150 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 SNORA75.3-201ENST00000391231 150 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 RN7SKP12-201ENST00000516275 143 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 AC090897.1-201ENST00000580909 226 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-90P-201ENST00000606352 106 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 AC012676.2-201ENST00000619258 186 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 U6.109-201ENST00000636749 87 ntBASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC44A3Q8N4M1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-1134P-201ENST00000365156 101 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 SNORD38.2-201ENST00000384470 69 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 MIR450A2-201ENST00000385022 100 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 MIR18B-201ENST00000454574 71 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 snoU13.21-201ENST00000459368 105 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SLC44A3Q8N4M1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 RNA5SP133-201ENST00000363368 119 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-219P-201ENST00000364728 107 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-497P-201ENST00000365316 104 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 SPINT5P-201ENST00000448174 155 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-1152P-201ENST00000384576 107 ntBASIC1.33□□□□□ -2.2
SLC44A3Q8N4M1 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
SLC44A3Q8N4M1 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
SLC44A3Q8N4M1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-820P-201ENST00000384273 107 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 RNU4-83P-201ENST00000410863 133 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 MIR4491-201ENST00000581087 68 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
SLC44A3Q8N4M1 RNU1-36P-201ENST00000365130 165 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-592P-201ENST00000411333 103 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 MTND5P40-201ENST00000559945 246 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 AL513043.2-201ENST00000573941 143 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 AC025521.1-201ENST00000621624 286 ntBASIC1.31□□□□□ -2.2
SLC44A3Q8N4M1 MIR494-201ENST00000349529 81 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-571P-201ENST00000384128 107 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 MIR181B2-201ENST00000385004 89 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-402P-201ENST00000410678 103 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 Y_RNA.620-201ENST00000411009 88 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-850P-201ENST00000516934 103 ntBASIC1.3□□□□□ -2.2
SLC44A3Q8N4M1 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 RNU7-185P-201ENST00000459215 60 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 SNORD79.1-201ENST00000516069 84 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-267P-201ENST00000516714 103 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 MIR4500-201ENST00000579472 76 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 MIR4668-201ENST00000582284 70 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 MIR151B-201ENST00000584249 96 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
SLC44A3Q8N4M1 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 RNA5SP173-201ENST00000364857 136 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 SNORD116-22-201ENST00000384430 92 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 SNORD83.1-201ENST00000411362 77 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 BX276092.1-201ENST00000427368 251 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms