Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 Y_RNA.588-201ENST00000391254 102 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 MIR934-201ENST00000401241 83 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 SNORA75.2-201ENST00000391138 150 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 SNORA75.3-201ENST00000391231 150 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 RNU6-1254P-201ENST00000391266 104 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 MIR1255A-201ENST00000408338 113 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 AL591704.2-201ENST00000421658 181 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 snoU13.21-201ENST00000459368 105 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 RNU6-902P-201ENST00000517212 91 ntBASIC2.03□□□□□ -2.08
SIX5Q8N196 SNORA25.9-201ENST00000365087 128 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 SNORD111-201ENST00000408139 94 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 Y_RNA.607-201ENST00000410597 98 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 Y_RNA.648-201ENST00000459455 110 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 TRMT112P2-201ENST00000512910 132 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 MIR4771-2-201ENST00000577758 74 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 MIR4771-1-201ENST00000582617 74 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 AL359821.1-201ENST00000605519 182 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 RNU7-10P-201ENST00000607194 63 ntBASIC2.02□□□□□ -2.09
SIX5Q8N196 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SIX5Q8N196 SNORD115-27-201ENST00000364430 82 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 MIR516A2-201ENST00000384888 90 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 MIR516A1-201ENST00000385033 90 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 RNA5SP225-201ENST00000410874 135 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 RNU6-1194P-201ENST00000516208 104 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 AC036111.3-201ENST00000526389 112 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 MIR4666B-201ENST00000578142 81 ntBASIC2.01□□□□□ -2.09
SIX5Q8N196 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SIX5Q8N196 RNU4-32P-201ENST00000363404 141 ntBASIC2□□□□□ -2.09
SIX5Q8N196 MIR1236-201ENST00000408340 102 ntBASIC2□□□□□ -2.09
SIX5Q8N196 AC023827.1-201ENST00000569247 97 ntBASIC2□□□□□ -2.09
SIX5Q8N196 MIR5002-201ENST00000584713 97 ntBASIC2□□□□□ -2.09
SIX5Q8N196 Y_RNA.13-201ENST00000362403 112 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 SNORA80D-201ENST00000384488 135 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 RNU6-994P-201ENST00000410507 111 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 AC087499.7-201ENST00000441958 109 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 MIR548H5-201ENST00000580314 60 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 AC013244.2-201ENST00000603396 103 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 MIR6082-201ENST00000613604 109 ntBASIC1.99□□□□□ -2.09
SIX5Q8N196 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SIX5Q8N196 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SIX5Q8N196 MIR635-201ENST00000384830 98 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 RNU6-910P-201ENST00000390844 107 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 RNU6-466P-201ENST00000391224 103 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 RNU4-62P-201ENST00000410125 130 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 SNORD63B-201ENST00000411005 70 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 AP1B1P2-201ENST00000416196 106 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 SNORD4B-201ENST00000459083 72 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 AC093729.1-201ENST00000513074 128 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 RNU6-65P-201ENST00000516332 98 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 AC106800.4-201ENST00000614905 153 ntBASIC1.98□□□□□ -2.09
SIX5Q8N196 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX5Q8N196 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIX5Q8N196 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIX5Q8N196 MIR125B2-201ENST00000385128 89 ntBASIC1.97□□□□□ -2.09
SIX5Q8N196 SNORD100-201ENST00000408573 76 ntBASIC1.97□□□□□ -2.09
SIX5Q8N196 AC015818.7-201ENST00000428754 109 ntBASIC1.97□□□□□ -2.09
SIX5Q8N196 MIR8081-201ENST00000611533 95 ntBASIC1.97□□□□□ -2.09
SIX5Q8N196 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
SIX5Q8N196 RNU6-652P-201ENST00000365488 107 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 RNU6-524P-201ENST00000384270 107 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 MIR489-201ENST00000384923 84 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 RNU7-90P-201ENST00000459216 62 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 MIR4536-1-201ENST00000583537 88 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.96□□□□□ -2.1
SIX5Q8N196 SNORD36A-201ENST00000362874 73 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 Y_RNA.313-201ENST00000365095 103 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 Y_RNA.363-201ENST00000365529 113 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 RNU6-787P-201ENST00000384032 107 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 RNU6-364P-201ENST00000384387 107 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 Y_RNA.536-201ENST00000384621 113 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 RNU7-21P-201ENST00000459430 62 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 Y_RNA.697-201ENST00000516776 113 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 RNU6-765P-201ENST00000516916 99 ntBASIC1.95□□□□□ -2.1
SIX5Q8N196 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SIX5Q8N196 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SIX5Q8N196 RPS26P5-201ENST00000418544 335 ntBASIC1.94□□□□□ -2.1
SIX5Q8N196 RNU7-85P-201ENST00000458851 63 ntBASIC1.94□□□□□ -2.1
SIX5Q8N196 snoU13.11-201ENST00000459219 104 ntBASIC1.94□□□□□ -2.1
SIX5Q8N196 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
SIX5Q8N196 RNU7-156P-201ENST00000517214 74 ntBASIC1.94□□□□□ -2.1
SIX5Q8N196 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
SIX5Q8N196 Y_RNA.56-201ENST00000362798 112 ntBASIC1.93□□□□□ -2.1
SIX5Q8N196 RNU7-40P-201ENST00000516397 64 ntBASIC1.93□□□□□ -2.1
SIX5Q8N196 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
SIX5Q8N196 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SIX5Q8N196 RNU7-106P-201ENST00000459514 67 ntBASIC1.92□□□□□ -2.1
SIX5Q8N196 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.92□□□□□ -2.1
SIX5Q8N196 MIR4676-201ENST00000583078 72 ntBASIC1.92□□□□□ -2.1
SIX5Q8N196 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms