Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR4696-201ENST00000581431 70 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 MIR8074-201ENST00000615081 81 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 snoU13.21-201ENST00000459368 105 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 MIR3140-201ENST00000583685 90 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 MIR8063-201ENST00000621930 81 ntBASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC116Q8IYX3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 AC244636.1-201ENST00000421152 228 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 AL773524.1-201ENST00000614065 229 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC116Q8IYX3 AC097635.1-201ENST00000450678 155 ntBASIC2.25□□□□□ -2.05
CCDC116Q8IYX3 snoU13.26-201ENST00000459452 105 ntBASIC2.25□□□□□ -2.05
CCDC116Q8IYX3 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
CCDC116Q8IYX3 SNORD83.1-201ENST00000411362 77 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 RNU7-156P-201ENST00000517214 74 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 AL627230.6-201ENST00000611129 280 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
CCDC116Q8IYX3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 RNU6-681P-201ENST00000364012 104 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 RNU6-765P-201ENST00000516916 99 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 MIR4713-201ENST00000582691 75 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 MTRNR2L2-201ENST00000604882 87 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC116Q8IYX3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC116Q8IYX3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CCDC116Q8IYX3 RNU6-471P-201ENST00000383944 106 ntBASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 MIR599-201ENST00000385069 95 ntBASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 Y_RNA.606-201ENST00000410579 103 ntBASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 AC019176.1-201ENST00000518519 225 ntBASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 MIR3675-201ENST00000583661 73 ntBASIC2.21□□□□□ -2.06
CCDC116Q8IYX3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CCDC116Q8IYX3 RNU6-935P-201ENST00000410371 100 ntBASIC2.2□□□□□ -2.06
CCDC116Q8IYX3 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
CCDC116Q8IYX3 MIR302D-201ENST00000362275 68 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 RNU6-934P-201ENST00000365154 107 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 AC097510.1-201ENST00000510945 133 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 RNA5SP24-201ENST00000516478 95 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 AC138907.6-201ENST00000568401 126 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 AC138869.1-201ENST00000568623 124 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 MIR3664-201ENST00000579074 99 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 AL096840.1-201ENST00000603287 93 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
CCDC116Q8IYX3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 MIR125B2-201ENST00000385128 89 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 RNU6-1052P-201ENST00000411398 104 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 MIR2113-201ENST00000459007 91 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 RNU6-719P-201ENST00000516671 104 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 U6.81-201ENST00000612550 106 ntBASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC116Q8IYX3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 U8.2-201ENST00000363156 134 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 RNU6-824P-201ENST00000363724 104 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 SNORD113.3-201ENST00000364630 78 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 SNORA24B-201ENST00000384176 131 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 RNU6-1265P-201ENST00000516342 103 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 RNU6-165P-201ENST00000517170 99 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 MIR4771-2-201ENST00000577758 74 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 MIR4771-1-201ENST00000582617 74 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 AC005520.4-201ENST00000604337 90 ntBASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC116Q8IYX3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 SNORD1A-201ENST00000364968 72 ntBASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 RNU6-895P-201ENST00000384125 103 ntBASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 snoU13.23-201ENST00000458863 104 ntBASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 AC079140.2-201ENST00000506193 142 ntBASIC2.16□□□□□ -2.06
CCDC116Q8IYX3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms