Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR563-201ENST00000385080 79 ntBASIC1.95□□□□□ -2.1
NPAS4Q8IUM7 BX276092.1-201ENST00000427368 251 ntBASIC1.95□□□□□ -2.1
NPAS4Q8IUM7 RNU6-850P-201ENST00000516934 103 ntBASIC1.95□□□□□ -2.1
NPAS4Q8IUM7 AC140658.3-201ENST00000567603 271 ntBASIC1.95□□□□□ -2.1
NPAS4Q8IUM7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
NPAS4Q8IUM7 MIR30D-201ENST00000362283 70 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 RNU4-32P-201ENST00000363404 141 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 SNORD115-37-201ENST00000363768 82 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 AL591704.2-201ENST00000421658 181 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 SNRPGP12-201ENST00000449481 213 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 SNORD4B-201ENST00000459083 72 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 MIR4712-201ENST00000583750 82 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 uc_338.6-201ENST00000613544 171 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 MIR6516-201ENST00000630554 81 ntBASIC1.94□□□□□ -2.1
NPAS4Q8IUM7 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 SNORA80D-201ENST00000384488 135 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 RNU7-62P-201ENST00000458856 62 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 AC023790.1-201ENST00000482174 347 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 SNORA4-201ENST00000584302 138 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
NPAS4Q8IUM7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.92□□□□□ -2.1
NPAS4Q8IUM7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.92□□□□□ -2.1
NPAS4Q8IUM7 RNU7-85P-201ENST00000458851 63 ntBASIC1.92□□□□□ -2.1
NPAS4Q8IUM7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.92□□□□□ -2.1
NPAS4Q8IUM7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
NPAS4Q8IUM7 MIR1236-201ENST00000408340 102 ntBASIC1.91□□□□□ -2.1
NPAS4Q8IUM7 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 MIR222-201ENST00000384992 110 ntBASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 SNORA25.13-201ENST00000516395 103 ntBASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 SNORA70.22-201ENST00000517160 124 ntBASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 MIR4781-201ENST00000585250 76 ntBASIC1.9□□□□□ -2.11
NPAS4Q8IUM7 RNU6-910P-201ENST00000390844 107 ntBASIC1.89□□□□□ -2.11
NPAS4Q8IUM7 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
NPAS4Q8IUM7 RNA5SP95-201ENST00000410319 137 ntBASIC1.89□□□□□ -2.11
NPAS4Q8IUM7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 RNU6-654P-201ENST00000364373 107 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 RNU6-571P-201ENST00000384128 107 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 MIR4303-201ENST00000581299 66 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 AL512598.1-201ENST00000610158 273 ntBASIC1.88□□□□□ -2.11
NPAS4Q8IUM7 MIR516A2-201ENST00000384888 90 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 MIR516A1-201ENST00000385033 90 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 MT-TF-201ENST00000387314 71 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 SNORD12-201ENST00000391002 90 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 RNU6-321P-201ENST00000410912 106 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 AL450471.1-201ENST00000447509 127 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 RNU7-90P-201ENST00000459216 62 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 snoU13.11-201ENST00000459219 104 ntBASIC1.87□□□□□ -2.11
NPAS4Q8IUM7 RNU6-478P-201ENST00000363904 110 ntBASIC1.86□□□□□ -2.11
NPAS4Q8IUM7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.86□□□□□ -2.11
NPAS4Q8IUM7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.86□□□□□ -2.11
NPAS4Q8IUM7 SNORA25.16-201ENST00000516741 121 ntBASIC1.86□□□□□ -2.11
NPAS4Q8IUM7 MIR4491-201ENST00000581087 68 ntBASIC1.86□□□□□ -2.11
NPAS4Q8IUM7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 SNORD113.3-201ENST00000364630 78 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 RNU6-129P-201ENST00000391022 107 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 SNORA75.2-201ENST00000391138 150 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 SNORA75.3-201ENST00000391231 150 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 RNU6-531P-201ENST00000516694 104 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 AC008163.1-202ENST00000636004 2889 ntBASIC1.85□□□□□ -2.11
NPAS4Q8IUM7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 MIR337-201ENST00000362281 93 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 SNORD36A-201ENST00000362874 73 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 RNU6-1229P-201ENST00000364295 107 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 SNORA72.6-201ENST00000384520 129 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 SNORD111-201ENST00000408139 94 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 AC073261.1-201ENST00000429409 121 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 RNU7-21P-201ENST00000459430 62 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 RNU7-106P-201ENST00000459514 67 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
NPAS4Q8IUM7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NPAS4Q8IUM7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 SNORD93-201ENST00000408813 74 ntBASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 MIR18B-201ENST00000454574 71 ntBASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 SNORD79.1-201ENST00000516069 84 ntBASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 MIR4536-1-201ENST00000583537 88 ntBASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPAS4Q8IUM7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 RNU6-624P-201ENST00000363411 107 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 RNU6-580P-201ENST00000365159 107 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 Y_RNA.565-201ENST00000384719 101 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 RNA5SP292-201ENST00000390974 118 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 RNU6-1254P-201ENST00000391266 104 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 MIR4796-201ENST00000580742 81 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 AC145423.2-201ENST00000610631 239 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 AP000553.5-201ENST00000641933 54 ntBASIC1.82□□□□□ -2.12
NPAS4Q8IUM7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms