Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 Y_RNA.323-201ENST00000365157 109 ntBASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 RNU6-589P-201ENST00000516485 107 ntBASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 AC013244.2-201ENST00000603396 103 ntBASIC1.09□□□□□ -2.23
LRRTM3Q86VH5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 MIR573-201ENST00000384964 99 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 AC004941.2-201ENST00000427009 228 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.709-201ENST00000516952 92 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 AL353765.1-201ENST00000605514 183 ntBASIC1.08□□□□□ -2.24
LRRTM3Q86VH5 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 AL353813.1-201ENST00000440700 253 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 MIR4694-201ENST00000578534 80 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 AC096720.1-201ENST00000604441 183 ntBASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRRTM3Q86VH5 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 SNORD38.1-201ENST00000363863 68 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 AL442128.1-201ENST00000615151 90 ntBASIC1.06□□□□□ -2.24
LRRTM3Q86VH5 HSBP1P2-201ENST00000299671 229 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 RNA5SP117-201ENST00000365294 118 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.377-201ENST00000365644 108 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 RNU6-1201P-201ENST00000384227 107 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 AC002350.1-201ENST00000490759 375 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 MTND5P40-201ENST00000559945 246 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.05□□□□□ -2.24
LRRTM3Q86VH5 RNY3P2-201ENST00000362918 102 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 RNU6-535P-201ENST00000384722 107 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 SNORD100-201ENST00000408573 76 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 MIR577-201ENST00000385196 96 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 MIR1302-5-201ENST00000408164 150 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.03□□□□□ -2.24
LRRTM3Q86VH5 RNU6-832P-201ENST00000363319 107 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 RNU6-215P-201ENST00000365169 102 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 SNORD20-201ENST00000384550 80 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 RNU6-919P-201ENST00000516731 104 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 RNU6-1006P-201ENST00000516998 103 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 AC141557.1-201ENST00000540982 400 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 RNU6-90P-201ENST00000606352 106 ntBASIC1.02□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.10-201ENST00000362371 110 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 RNU4-36P-201ENST00000364294 144 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 RNU6-571P-201ENST00000384128 107 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 RNU6-291P-201ENST00000384720 107 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 BX276092.1-201ENST00000427368 251 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 SPINT5P-201ENST00000448174 155 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
LRRTM3Q86VH5 RNU6-1099P-201ENST00000363533 107 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.163-201ENST00000363702 113 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 MIR548G-201ENST00000408442 89 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 AL078603.1-201ENST00000603824 313 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 MIR7111-201ENST00000619751 72 ntBASIC1□□□□□ -2.25
LRRTM3Q86VH5 MIR635-201ENST00000384830 98 ntBASIC0.99□□□□□ -2.25
LRRTM3Q86VH5 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
LRRTM3Q86VH5 RNY4P18-201ENST00000391107 89 ntBASIC0.99□□□□□ -2.25
LRRTM3Q86VH5 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
LRRTM3Q86VH5 RNU6-469P-201ENST00000516253 101 ntBASIC0.99□□□□□ -2.25
LRRTM3Q86VH5 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
LRRTM3Q86VH5 RNU6-1113P-201ENST00000384348 107 ntBASIC0.98□□□□□ -2.25
LRRTM3Q86VH5 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
LRRTM3Q86VH5 SNRPGP12-201ENST00000449481 213 ntBASIC0.98□□□□□ -2.25
LRRTM3Q86VH5 uc_338.16-201ENST00000621804 95 ntBASIC0.98□□□□□ -2.25
LRRTM3Q86VH5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.78-201ENST00000362970 110 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 RNU6-106P-201ENST00000384405 107 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 Y_RNA.659-201ENST00000515994 113 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 RNU6-850P-201ENST00000516934 103 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 AC138869.1-201ENST00000568623 124 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
LRRTM3Q86VH5 MIR18A-201ENST00000362310 71 ntBASIC0.96□□□□□ -2.26
LRRTM3Q86VH5 SNORD45B-201ENST00000364617 72 ntBASIC0.96□□□□□ -2.26
LRRTM3Q86VH5 RNU6-110P-201ENST00000384508 104 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 303.3 ms