Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SNORD100-201ENST00000408573 76 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 SNORD63B-201ENST00000411005 70 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 SNORA31.2-201ENST00000516019 134 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 AC036111.3-201ENST00000526389 112 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 MIR4536-1-201ENST00000583537 88 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 MIR4712-201ENST00000583750 82 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 AC106800.4-201ENST00000614905 153 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 MIR4662A-201ENST00000637499 67 ntBASIC1.71□□□□□ -2.14
UBE3DQ7Z6J8 RNU4-32P-201ENST00000363404 141 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.283-201ENST00000364798 112 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-934P-201ENST00000365154 107 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-811P-201ENST00000384069 107 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 AC048334.1-201ENST00000477975 159 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 SNORA25.13-201ENST00000516395 103 ntBASIC1.7□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-624P-201ENST00000363411 107 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 SNORA80D-201ENST00000384488 135 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 MIR125B2-201ENST00000385128 89 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 MIR548U-201ENST00000390728 81 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 SNORA75.2-201ENST00000391138 150 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 SNORA75.3-201ENST00000391231 150 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 snoU13.11-201ENST00000459219 104 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-557P-201ENST00000516842 110 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
UBE3DQ7Z6J8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.94-201ENST00000363068 106 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.536-201ENST00000384621 113 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-129P-201ENST00000391022 107 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 MIR1289-2-201ENST00000408360 111 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 MIR1261-201ENST00000408659 82 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 AC023790.1-201ENST00000482174 347 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.660-201ENST00000516002 120 ntBASIC1.68□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.67□□□□□ -2.14
UBE3DQ7Z6J8 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
UBE3DQ7Z6J8 RNU7-21P-201ENST00000459430 62 ntBASIC1.67□□□□□ -2.14
UBE3DQ7Z6J8 MIR4796-201ENST00000580742 81 ntBASIC1.67□□□□□ -2.14
UBE3DQ7Z6J8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 RNU6-1260P-201ENST00000362944 107 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 SNORD83.1-201ENST00000411362 77 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 RPS26P5-201ENST00000418544 335 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 AC097635.1-201ENST00000450678 155 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 RNU7-106P-201ENST00000459514 67 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 FGF7P7-201ENST00000514120 227 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 AC013244.2-201ENST00000603396 103 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
UBE3DQ7Z6J8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
UBE3DQ7Z6J8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
UBE3DQ7Z6J8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 SNORD12-201ENST00000391002 90 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-380P-201ENST00000410207 107 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 RNU7-90P-201ENST00000459216 62 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 snoU13.21-201ENST00000459368 105 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-75P-201ENST00000515944 104 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 RNU7-153P-201ENST00000516455 62 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 MIR4771-2-201ENST00000577758 74 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 MIR4771-1-201ENST00000582617 74 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 AC104996.3-201ENST00000590718 94 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
UBE3DQ7Z6J8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 Y_RNA.221-201ENST00000364248 96 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 TRAJ51-201ENST00000504127 63 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-295P-201ENST00000516901 104 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 AC138907.6-201ENST00000568401 126 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 AC138869.1-201ENST00000568623 124 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 MIR3064-201ENST00000581130 66 ntBASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE3DQ7Z6J8 AC092628.1-201ENST00000436250 252 ntBASIC1.63□□□□□ -2.15
UBE3DQ7Z6J8 SNORA25.9-201ENST00000365087 128 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 SNORA26.9-201ENST00000391322 122 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 MIR938-201ENST00000401216 83 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 SNORD79.1-201ENST00000516069 84 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 RNU7-156P-201ENST00000517214 74 ntBASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.62□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-1094P-201ENST00000362416 104 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-776P-201ENST00000364403 104 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-1022P-201ENST00000365049 104 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 Y_RNA.491-201ENST00000384417 107 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 MIR518E-201ENST00000385252 88 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 SNORA11.2-201ENST00000408318 127 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 RNU7-195P-201ENST00000458793 62 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-448P-201ENST00000517052 107 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 MIR4676-201ENST00000583078 72 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
UBE3DQ7Z6J8 SNORA63.2-201ENST00000362603 126 ntBASIC1.6□□□□□ -2.15
UBE3DQ7Z6J8 RNU6-957P-201ENST00000363652 99 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms