Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 Y_RNA.43-201ENST00000362670 111 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 MIR125B2-201ENST00000385128 89 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-972P-201ENST00000391208 107 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 SPINT5P-201ENST00000448174 155 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 snoU13.21-201ENST00000459368 105 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-795P-201ENST00000516323 103 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-765P-201ENST00000516916 99 ntBASIC1.53□□□□□ -2.16
RUFY4Q6ZNE9 RNA5SP327-201ENST00000362494 101 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-571P-201ENST00000384128 107 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-813P-201ENST00000384691 107 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 MIR19B1-201ENST00000384829 87 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 MIR4771-2-201ENST00000577758 74 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 AC090897.1-201ENST00000580909 226 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 MIR4771-1-201ENST00000582617 74 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 AC027335.2-201ENST00000624030 375 ntBASIC1.52□□□□□ -2.17
RUFY4Q6ZNE9 Y_RNA.369-201ENST00000365568 117 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 AC109327.2-201ENST00000448339 378 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 SNRPGP12-201ENST00000449481 213 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 AC067940.1-201ENST00000458411 300 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 MIR4500-201ENST00000579472 76 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 AC091304.10-201ENST00000641554 121 ntBASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RUFY4Q6ZNE9 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
RUFY4Q6ZNE9 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
RUFY4Q6ZNE9 RNU7-40P-201ENST00000516397 64 ntBASIC1.5□□□□□ -2.17
RUFY4Q6ZNE9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RUFY4Q6ZNE9 MIR1-1-201ENST00000362147 71 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-403P-201ENST00000363163 104 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 Y_RNA.220-201ENST00000364244 109 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-480P-201ENST00000384332 107 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-887P-201ENST00000410660 100 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 MIR6082-201ENST00000613604 109 ntBASIC1.49□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-1244P-201ENST00000363614 108 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-644P-201ENST00000391155 98 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 MIR938-201ENST00000401216 83 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 RNY4P30-201ENST00000410216 95 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 SNORD92-201ENST00000585078 85 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 RNU7-10P-201ENST00000607194 63 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 MALAT1.1-201ENST00000618249 95 ntBASIC1.48□□□□□ -2.17
RUFY4Q6ZNE9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 Y_RNA.342-201ENST00000365352 113 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 SNORD114-22-201ENST00000365423 72 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 SNORA72.6-201ENST00000384520 129 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 MIR200A-201ENST00000384875 90 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 MIR1827-201ENST00000408549 66 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 FABP5P4-201ENST00000437203 171 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 RNU7-61P-201ENST00000515897 61 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-531P-201ENST00000516694 104 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 SNORA25.16-201ENST00000516741 121 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 MIR5582-201ENST00000579697 68 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 RNU6-86P-201ENST00000606534 107 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 AL136317.1-201ENST00000612653 226 ntBASIC1.47□□□□□ -2.17
RUFY4Q6ZNE9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 Y_RNA.467-201ENST00000384297 102 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 RNU7-156P-201ENST00000517214 74 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 MIR8066-201ENST00000617280 78 ntBASIC1.46□□□□□ -2.18
RUFY4Q6ZNE9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-369P-201ENST00000362515 102 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-1255P-201ENST00000363434 112 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-364P-201ENST00000384387 107 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 MIR4804-201ENST00000581683 73 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 MIR548Z-201ENST00000584743 97 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.45□□□□□ -2.18
RUFY4Q6ZNE9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 SNORD116-10-201ENST00000363791 102 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 MIR100-201ENST00000385259 80 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-977P-201ENST00000516411 103 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-850P-201ENST00000516934 103 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 AP003327.1-201ENST00000529684 127 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 MIR548H5-201ENST00000580314 60 ntBASIC1.44□□□□□ -2.18
RUFY4Q6ZNE9 MIR101-2-201ENST00000362195 79 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 RNU1-124P-201ENST00000363861 145 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 MIR488-201ENST00000365739 83 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 MIR7-2-201ENST00000384970 110 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 U7.7-201ENST00000459276 60 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 U7.3-201ENST00000616123 62 ntBASIC1.43□□□□□ -2.18
RUFY4Q6ZNE9 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
RUFY4Q6ZNE9 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms