Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 MIR3678-201ENST00000578455 94 ntBASIC0.4□□□□□ -2.35
Q6P435 AL035470.1-201ENST00000622571 220 ntBASIC0.4□□□□□ -2.35
Q6P435 AP001362.1-201ENST00000625165 124 ntBASIC0.4□□□□□ -2.35
Q6P435 U6.95-201ENST00000636931 70 ntBASIC0.4□□□□□ -2.35
Q6P435 Y_RNA.224-201ENST00000364308 111 ntBASIC0.39□□□□□ -2.35
Q6P435 Y_RNA.353-201ENST00000365440 108 ntBASIC0.39□□□□□ -2.35
Q6P435 Y_RNA.360-201ENST00000365512 102 ntBASIC0.39□□□□□ -2.35
Q6P435 Y_RNA.549-201ENST00000384657 102 ntBASIC0.39□□□□□ -2.35
Q6P435 Y_RNA.563-201ENST00000384707 108 ntBASIC0.39□□□□□ -2.35
Q6P435 AC007012.1-201ENST00000567192 175 ntBASIC0.39□□□□□ -2.35
Q6P435 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.39□□□□□ -2.35
Q6P435 AC132825.6-201ENST00000638861 357 ntBASIC0.39□□□□□ -2.35
Q6P435 MIR101-2-201ENST00000362195 79 ntBASIC0.38□□□□□ -2.35
Q6P435 Y_RNA.56-201ENST00000362798 112 ntBASIC0.38□□□□□ -2.35
Q6P435 SNORA63.5-201ENST00000363548 123 ntBASIC0.38□□□□□ -2.35
Q6P435 Y_RNA.174-201ENST00000363781 105 ntBASIC0.38□□□□□ -2.35
Q6P435 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
Q6P435 RNU6-22P-201ENST00000384355 107 ntBASIC0.38□□□□□ -2.35
Q6P435 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
Q6P435 MIR548A3-201ENST00000385297 97 ntBASIC0.38□□□□□ -2.35
Q6P435 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
Q6P435 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.38□□□□□ -2.35
Q6P435 BX276092.1-201ENST00000427368 251 ntBASIC0.38□□□□□ -2.35
Q6P435 AC008267.6-201ENST00000441664 139 ntBASIC0.38□□□□□ -2.35
Q6P435 RNA5SP121-201ENST00000516537 101 ntBASIC0.38□□□□□ -2.35
Q6P435 RNU6-1223P-201ENST00000517124 104 ntBASIC0.38□□□□□ -2.35
Q6P435 MIR5000-201ENST00000577717 103 ntBASIC0.38□□□□□ -2.35
Q6P435 MIR4679-2-201ENST00000578358 77 ntBASIC0.38□□□□□ -2.35
Q6P435 AL162726.3-218ENST00000636401 95 ntBASIC0.38□□□□□ -2.35
Q6P435 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Q6P435 Y_RNA.85-201ENST00000363014 111 ntBASIC0.37□□□□□ -2.35
Q6P435 Y_RNA.116-201ENST00000363292 103 ntBASIC0.37□□□□□ -2.35
Q6P435 Y_RNA.155-201ENST00000363632 101 ntBASIC0.37□□□□□ -2.35
Q6P435 Y_RNA.226-201ENST00000364337 114 ntBASIC0.37□□□□□ -2.35
Q6P435 RNU6-409P-201ENST00000384114 104 ntBASIC0.37□□□□□ -2.35
Q6P435 RNU6-1117P-201ENST00000384525 104 ntBASIC0.37□□□□□ -2.35
Q6P435 RNU6-816P-201ENST00000390914 107 ntBASIC0.37□□□□□ -2.35
Q6P435 RNU6-1268P-201ENST00000391214 107 ntBASIC0.37□□□□□ -2.35
Q6P435 RNU6-1239P-201ENST00000391310 107 ntBASIC0.37□□□□□ -2.35
Q6P435 MIR1287-201ENST00000408492 90 ntBASIC0.37□□□□□ -2.35
Q6P435 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
Q6P435 RPL39P34-201ENST00000477141 156 ntBASIC0.37□□□□□ -2.35
Q6P435 RNA5SP220-201ENST00000516298 104 ntBASIC0.37□□□□□ -2.35
Q6P435 AL078603.1-201ENST00000603824 313 ntBASIC0.37□□□□□ -2.35
Q6P435 AL670379.3-201ENST00000605040 251 ntBASIC0.37□□□□□ -2.35
Q6P435 RNA5SP347-201ENST00000362445 119 ntBASIC0.36□□□□□ -2.35
Q6P435 RNU6-1313P-201ENST00000362622 102 ntBASIC0.36□□□□□ -2.35
Q6P435 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
Q6P435 Y_RNA.247-201ENST00000364500 92 ntBASIC0.36□□□□□ -2.35
Q6P435 SNORD113-1-201ENST00000365321 69 ntBASIC0.36□□□□□ -2.35
Q6P435 Y_RNA.507-201ENST00000384500 99 ntBASIC0.36□□□□□ -2.35
Q6P435 RNU6-1168P-201ENST00000390831 104 ntBASIC0.36□□□□□ -2.35
Q6P435 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
Q6P435 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
Q6P435 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
Q6P435 RNA5SP94-201ENST00000516917 108 ntBASIC0.36□□□□□ -2.35
Q6P435 RNU6-1006P-201ENST00000516998 103 ntBASIC0.36□□□□□ -2.35
Q6P435 AL512310.12-203ENST00000640543 90 ntBASIC0.36□□□□□ -2.35
Q6P435 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
Q6P435 RNA5SP205-201ENST00000364653 136 ntBASIC0.35□□□□□ -2.35
Q6P435 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
Q6P435 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
Q6P435 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
Q6P435 TRAJ51-201ENST00000504127 63 ntBASIC0.35□□□□□ -2.35
Q6P435 RNU6-469P-201ENST00000516253 101 ntBASIC0.35□□□□□ -2.35
Q6P435 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
Q6P435 RNU6-62P-201ENST00000516526 102 ntBASIC0.35□□□□□ -2.35
Q6P435 RNU6-1018P-201ENST00000516577 106 ntBASIC0.35□□□□□ -2.35
Q6P435 MIR548H5-201ENST00000580314 60 ntBASIC0.35□□□□□ -2.35
Q6P435 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
Q6P435 Y_RNA.309-201ENST00000365046 111 ntBASIC0.34□□□□□ -2.36
Q6P435 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.36
Q6P435 RNU6-1201P-201ENST00000384227 107 ntBASIC0.34□□□□□ -2.36
Q6P435 SNORD116-21-201ENST00000384507 92 ntBASIC0.34□□□□□ -2.36
Q6P435 SNORD28-201ENST00000384706 75 ntBASIC0.34□□□□□ -2.36
Q6P435 Y_RNA.567-201ENST00000384736 106 ntBASIC0.34□□□□□ -2.36
Q6P435 MIR635-201ENST00000384830 98 ntBASIC0.34□□□□□ -2.36
Q6P435 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
Q6P435 RNU4-61P-201ENST00000411243 107 ntBASIC0.34□□□□□ -2.36
Q6P435 AL606753.1-201ENST00000427435 87 ntBASIC0.34□□□□□ -2.36
Q6P435 SNRPGP12-201ENST00000449481 213 ntBASIC0.34□□□□□ -2.36
Q6P435 RNU6-406P-201ENST00000516470 107 ntBASIC0.34□□□□□ -2.36
Q6P435 AC068339.1-201ENST00000526965 141 ntBASIC0.34□□□□□ -2.36
Q6P435 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
Q6P435 AC138869.1-201ENST00000568623 124 ntBASIC0.34□□□□□ -2.36
Q6P435 Y_RNA.35-201ENST00000362601 101 ntBASIC0.33□□□□□ -2.36
Q6P435 U8.6-201ENST00000364939 135 ntBASIC0.33□□□□□ -2.36
Q6P435 RNU6-571P-201ENST00000384128 107 ntBASIC0.33□□□□□ -2.36
Q6P435 MIR577-201ENST00000385196 96 ntBASIC0.33□□□□□ -2.36
Q6P435 MIR518E-201ENST00000385252 88 ntBASIC0.33□□□□□ -2.36
Q6P435 RNU6-1154P-201ENST00000391001 104 ntBASIC0.33□□□□□ -2.36
Q6P435 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
Q6P435 RNA5SP247-201ENST00000411181 105 ntBASIC0.33□□□□□ -2.36
Q6P435 AC244505.6-201ENST00000452829 130 ntBASIC0.33□□□□□ -2.36
Q6P435 RNU6-479P-201ENST00000516348 105 ntBASIC0.33□□□□□ -2.36
Q6P435 RNU6-850P-201ENST00000516934 103 ntBASIC0.33□□□□□ -2.36
Q6P435 RNU6-789P-201ENST00000517105 102 ntBASIC0.33□□□□□ -2.36
Q6P435 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
Q6P435 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
Q6P435 MIR5009-201ENST00000578736 100 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms