Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-616P-201ENST00000384353 107 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 RNU6-535P-201ENST00000384722 107 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 RNU6-1307P-201ENST00000391012 103 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 AC105081.1-201ENST00000617727 106 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
ZNF544Q6NX49 Y_RNA.328-201ENST00000365208 113 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 Y_RNA.448-201ENST00000384185 108 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 RNU7-6P-201ENST00000516845 62 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 RNU6-1234P-201ENST00000516877 103 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 DEFB131E-201ENST00000532329 154 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 MIR4639-201ENST00000584938 69 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 AP001362.1-201ENST00000625165 124 ntBASIC0.35□□□□□ -2.35
ZNF544Q6NX49 RNU6-235P-201ENST00000362644 107 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 SNORA36.1-201ENST00000363424 132 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 RNA5SP517-201ENST00000364724 117 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.528-201ENST00000384575 108 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 MIR548D2-201ENST00000384955 97 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 MIR759-201ENST00000390224 91 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 MIR1263-201ENST00000408324 86 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 RNU6-735P-201ENST00000410612 107 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 AC244505.6-201ENST00000452829 130 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 RNU6-469P-201ENST00000516253 101 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 MIR3133-201ENST00000583157 78 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.773-201ENST00000607168 90 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 AC025166.1-201ENST00000612411 163 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
ZNF544Q6NX49 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.34□□□□□ -2.36
ZNF544Q6NX49 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 RNU6-704P-201ENST00000364162 103 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 SNORA8.2-201ENST00000384372 139 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 SNORD28-201ENST00000384706 75 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR644A-201ENST00000385262 94 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
ZNF544Q6NX49 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.33□□□□□ -2.36
ZNF544Q6NX49 RNU6-772P-201ENST00000516042 105 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.712-201ENST00000517011 92 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR548H5-201ENST00000580314 60 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 RNU7-10P-201ENST00000607194 63 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR376B-201ENST00000614515 100 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
ZNF544Q6NX49 MIR101-2-201ENST00000362195 79 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 RNY4P6-201ENST00000363667 96 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 RNA5SP245-201ENST00000364239 121 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.346-201ENST00000365385 112 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 RNU6-80P-201ENST00000384195 107 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 MIR548I2-201ENST00000408348 149 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 SCARNA16.5-201ENST00000517114 183 ntBASIC0.32□□□□□ -2.36
ZNF544Q6NX49 MTND5P18-201ENST00000445624 1801 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ZNF544Q6NX49 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
ZNF544Q6NX49 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 RNU6-865P-201ENST00000364772 107 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.567-201ENST00000384736 106 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 MIR519A1-201ENST00000385257 85 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 RNU6-521P-201ENST00000516663 105 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 RNU6-971P-201ENST00000516920 106 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 MIR1255B1-201ENST00000636325 63 ntBASIC0.31□□□□□ -2.36
ZNF544Q6NX49 RNU6-363P-201ENST00000362895 105 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 SNORA63.5-201ENST00000363548 123 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.344-201ENST00000365381 112 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.360-201ENST00000365512 102 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 RNU6-571P-201ENST00000384128 107 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 SNORD71-201ENST00000411292 86 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.630-201ENST00000411370 108 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 RNU6-1061P-201ENST00000516530 99 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 MIR4500-201ENST00000579472 76 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 MIR3914-2-201ENST00000637339 95 ntBASIC0.3□□□□□ -2.36
ZNF544Q6NX49 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-1313P-201ENST00000362622 102 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.218-201ENST00000364218 104 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-1229P-201ENST00000364295 107 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU4-67P-201ENST00000364569 141 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 MIR34C-201ENST00000384831 77 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 AC097635.1-201ENST00000450678 155 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU7-107P-201ENST00000459121 61 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-1211P-201ENST00000459179 105 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-659P-201ENST00000516454 104 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-1018P-201ENST00000516577 106 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNA5SP268-201ENST00000516828 124 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 RNU6-1006P-201ENST00000516998 103 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 MIR4679-2-201ENST00000578358 77 ntBASIC0.29□□□□□ -2.36
ZNF544Q6NX49 AL157777.2-201ENST00000258070 137 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 Y_RNA.85-201ENST00000363014 111 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 RNU6-774P-201ENST00000363238 107 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 AL353813.1-201ENST00000440700 253 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
ZNF544Q6NX49 AC244669.1-204ENST00000621564 178 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 504.9 ms