Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 IGLL4P-201ENST00000614590 133 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 RNU6-1152P-201ENST00000384576 107 ntBASIC1.89□□□□□ -2.11
USPL1Q5W0Q7 AL354695.1-201ENST00000427935 228 ntBASIC1.89□□□□□ -2.11
USPL1Q5W0Q7 AC048334.1-201ENST00000477975 159 ntBASIC1.89□□□□□ -2.11
USPL1Q5W0Q7 uc_338.6-201ENST00000613544 171 ntBASIC1.89□□□□□ -2.11
USPL1Q5W0Q7 MIR8066-201ENST00000617280 78 ntBASIC1.89□□□□□ -2.11
USPL1Q5W0Q7 AL161722.3-201ENST00000605789 2983 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 RNU4-58P-201ENST00000363192 141 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 RNY1P1-201ENST00000364372 112 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 SNORD93-201ENST00000408813 74 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 RNA5SP95-201ENST00000410319 137 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 SNORA31.2-201ENST00000516019 134 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 AL353770.2-201ENST00000620024 78 ntBASIC1.88□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 SNORD111-201ENST00000408139 94 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 AL591704.2-201ENST00000421658 181 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 MIR4491-201ENST00000581087 68 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 MIR4452-201ENST00000583004 71 ntBASIC1.87□□□□□ -2.11
USPL1Q5W0Q7 RNU1-36P-201ENST00000365130 165 ntBASIC1.86□□□□□ -2.11
USPL1Q5W0Q7 SNORA80D-201ENST00000384488 135 ntBASIC1.86□□□□□ -2.11
USPL1Q5W0Q7 MIR181B2-201ENST00000385004 89 ntBASIC1.86□□□□□ -2.11
USPL1Q5W0Q7 MIR4668-201ENST00000582284 70 ntBASIC1.86□□□□□ -2.11
USPL1Q5W0Q7 MIR494-201ENST00000349529 81 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 MIR1304-201ENST00000408243 91 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 AL161932.1-201ENST00000437408 146 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 RNU6-850P-201ENST00000516934 103 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 AC036111.3-201ENST00000526389 112 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 AL513043.2-201ENST00000573941 143 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
USPL1Q5W0Q7 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 SNORA75.2-201ENST00000391138 150 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 SNORA75.3-201ENST00000391231 150 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 RNU6-402P-201ENST00000410678 103 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 RNU7-185P-201ENST00000459215 60 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 AC106800.4-201ENST00000614905 153 ntBASIC1.84□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.83□□□□□ -2.12
USPL1Q5W0Q7 RNU6-219P-201ENST00000364728 107 ntBASIC1.83□□□□□ -2.12
USPL1Q5W0Q7 SNORD114-22-201ENST00000365423 72 ntBASIC1.83□□□□□ -2.12
USPL1Q5W0Q7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.83□□□□□ -2.12
USPL1Q5W0Q7 AC023934.1-201ENST00000574529 2389 ntBASIC1.83□□□□□ -2.12
USPL1Q5W0Q7 RNU6-934P-201ENST00000365154 107 ntBASIC1.82□□□□□ -2.12
USPL1Q5W0Q7 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
USPL1Q5W0Q7 RNU7-21P-201ENST00000459430 62 ntBASIC1.82□□□□□ -2.12
USPL1Q5W0Q7 RNU7-10P-201ENST00000607194 63 ntBASIC1.82□□□□□ -2.12
USPL1Q5W0Q7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
USPL1Q5W0Q7 RNA5SP173-201ENST00000364857 136 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 RNU6-242P-201ENST00000384359 107 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 RNU7-90P-201ENST00000459216 62 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 RNU6-765P-201ENST00000516916 99 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 AC025521.1-201ENST00000621624 286 ntBASIC1.81□□□□□ -2.12
USPL1Q5W0Q7 MIR96-201ENST00000362288 78 ntBASIC1.8□□□□□ -2.12
USPL1Q5W0Q7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.8□□□□□ -2.12
USPL1Q5W0Q7 SNORD12-201ENST00000391002 90 ntBASIC1.8□□□□□ -2.12
USPL1Q5W0Q7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.8□□□□□ -2.12
USPL1Q5W0Q7 RNU4-83P-201ENST00000410863 133 ntBASIC1.8□□□□□ -2.12
USPL1Q5W0Q7 RNU6-633P-201ENST00000362612 103 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 Y_RNA.219-201ENST00000364232 113 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 BX276092.1-201ENST00000427368 251 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 AC022137.1-201ENST00000483735 151 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 RNU6-531P-201ENST00000516694 104 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 SNORA25.16-201ENST00000516741 121 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 RMST_2.1-201ENST00000617263 136 ntBASIC1.79□□□□□ -2.12
USPL1Q5W0Q7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 RNU6-403P-201ENST00000363163 104 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 SNORA72.6-201ENST00000384520 129 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 RNY1P4-201ENST00000384595 115 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 RNU6-910P-201ENST00000390844 107 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 SNORD79.1-201ENST00000516069 84 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
USPL1Q5W0Q7 RNU6-509P-201ENST00000363519 107 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 RNU6-497P-201ENST00000365316 104 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 RNU6-1254P-201ENST00000391266 104 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 SNORD83.1-201ENST00000411362 77 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 RPS26P5-201ENST00000418544 335 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 AP003327.1-201ENST00000529684 127 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 MIR548H5-201ENST00000580314 60 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 MIR6078-201ENST00000611069 100 ntBASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.77□□□□□ -2.13
USPL1Q5W0Q7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 MIR101-2-201ENST00000362195 79 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.426-201ENST00000384068 113 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 RNU6-519P-201ENST00000410590 108 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 MIR5588-201ENST00000581890 63 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 AC020891.4-201ENST00000605745 93 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.76□□□□□ -2.13
USPL1Q5W0Q7 RNU6-979P-201ENST00000383896 107 ntBASIC1.75□□□□□ -2.13
USPL1Q5W0Q7 RNU6-573P-201ENST00000383938 106 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms