Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RNU6-765P-201ENST00000516916 99 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 uc_338.28-201ENST00000612082 187 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL442128.1-201ENST00000615151 90 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 SNORA63.4-201ENST00000362763 126 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNY3P2-201ENST00000362918 102 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.78-201ENST00000362970 110 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.81-201ENST00000362997 102 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.247-201ENST00000364500 92 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU7-102P-201ENST00000458948 62 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-531P-201ENST00000516694 104 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 MIR3613-201ENST00000579844 87 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 AC008608.1-201ENST00000603910 127 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU4-58P-201ENST00000363192 141 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNY1P10-201ENST00000363268 113 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORD38.1-201ENST00000363863 68 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORA72.6-201ENST00000384520 129 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU6-904P-201ENST00000516206 101 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 MIR4500-201ENST00000579472 76 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 AC090897.1-201ENST00000580909 226 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 RNU6-537P-201ENST00000517277 103 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 DEFB131E-201ENST00000532329 154 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 RNU6-766P-201ENST00000362478 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU4-36P-201ENST00000364294 144 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU6-756P-201ENST00000383997 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORA51.5-201ENST00000384126 131 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORD38.2-201ENST00000384470 69 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.601-201ENST00000410500 113 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORA19.1-201ENST00000410656 129 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 AL031737.1-201ENST00000450125 223 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.10-201ENST00000362371 110 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 RNU6-147P-201ENST00000383983 107 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR590-201ENST00000385008 97 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR548G-201ENST00000408442 89 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 SNRPGP12-201ENST00000449481 213 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AC096720.1-201ENST00000604441 183 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR450A1-201ENST00000362262 91 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.173-201ENST00000363776 113 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU6-1163P-201ENST00000364516 107 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU1-93P-201ENST00000364704 169 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 BX276092.1-201ENST00000427368 251 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU6-448P-201ENST00000517052 107 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 MTND5P40-201ENST00000559945 246 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-153P-201ENST00000364422 104 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-571P-201ENST00000384128 107 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-291P-201ENST00000384720 107 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SNORD100-201ENST00000408573 76 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SPINT5P-201ENST00000448174 155 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC109327.2-201ENST00000448339 378 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.659-201ENST00000515994 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SCARNA23-201ENST00000516060 130 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-850P-201ENST00000516934 103 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 MIR4439-201ENST00000583746 80 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.818-201ENST00000618813 71 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC091304.10-201ENST00000641554 121 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.95-201ENST00000363079 95 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 SNORD45B-201ENST00000364617 72 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-109P-201ENST00000516364 107 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-184P-201ENST00000516514 107 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 MIR4777-201ENST00000583710 86 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms