Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 U6.109-201ENST00000636749 87 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-215P-201ENST00000365169 102 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1014P-201ENST00000383940 103 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 SNORD38.2-201ENST00000384470 69 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 MIR605-201ENST00000385078 83 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 AL353813.1-201ENST00000440700 253 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 SNORA25.16-201ENST00000516741 121 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 AL512310.12-203ENST00000640543 90 ntBASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PTCHD3Q3KNS1 Y_RNA.377-201ENST00000365644 108 ntBASIC0.95□□□□□ -2.26
PTCHD3Q3KNS1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PTCHD3Q3KNS1 DEFB131E-201ENST00000532329 154 ntBASIC0.95□□□□□ -2.26
PTCHD3Q3KNS1 MIR4694-201ENST00000578534 80 ntBASIC0.95□□□□□ -2.26
PTCHD3Q3KNS1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 HSBP1P2-201ENST00000299671 229 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 SNORA72.6-201ENST00000384520 129 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 MIR34C-201ENST00000384831 77 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 MIR520H-201ENST00000385126 88 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-531P-201ENST00000516694 104 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-448P-201ENST00000517052 107 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
PTCHD3Q3KNS1 SNORD38.1-201ENST00000363863 68 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1201P-201ENST00000384227 107 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-919P-201ENST00000516731 104 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 AC008608.1-201ENST00000603910 127 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 AL442128.1-201ENST00000615151 90 ntBASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
PTCHD3Q3KNS1 RNY3P2-201ENST00000362918 102 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 Y_RNA.78-201ENST00000362970 110 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 SNORD20-201ENST00000384550 80 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 RNY4P18-201ENST00000391107 89 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 MIR4500-201ENST00000579472 76 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
PTCHD3Q3KNS1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 MIR577-201ENST00000385196 96 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 MIR1302-5-201ENST00000408164 150 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 SNORD100-201ENST00000408573 76 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
PTCHD3Q3KNS1 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-832P-201ENST00000363319 107 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 MIR573-201ENST00000384964 99 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 SNORD99-201ENST00000408612 74 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 AC002350.1-201ENST00000490759 375 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 RNU7-10P-201ENST00000607194 63 ntBASIC0.9□□□□□ -2.27
PTCHD3Q3KNS1 MIR101-2-201ENST00000362195 79 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.10-201ENST00000362371 110 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.163-201ENST00000363702 113 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-755P-201ENST00000364400 103 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-571P-201ENST00000384128 107 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-106P-201ENST00000384405 107 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 AC141557.1-201ENST00000540982 400 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR548H5-201ENST00000580314 60 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
PTCHD3Q3KNS1 RNU4-36P-201ENST00000364294 144 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 AC244098.3-201ENST00000424803 96 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-90P-201ENST00000606352 106 ntBASIC0.88□□□□□ -2.27
PTCHD3Q3KNS1 AL035461.1-201ENST00000421490 332 ntBASIC0.87□□□□□ -2.27
PTCHD3Q3KNS1 SNRPGP12-201ENST00000449481 213 ntBASIC0.87□□□□□ -2.27
PTCHD3Q3KNS1 MTND5P40-201ENST00000559945 246 ntBASIC0.87□□□□□ -2.27
PTCHD3Q3KNS1 MIR4439-201ENST00000583746 80 ntBASIC0.87□□□□□ -2.27
PTCHD3Q3KNS1 RNA5SP117-201ENST00000365294 118 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-535P-201ENST00000384722 107 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 MIR548G-201ENST00000408442 89 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.601-201ENST00000410500 113 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.173-201ENST00000363776 113 ntBASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 Y_RNA.247-201ENST00000364500 92 ntBASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 MIR3612-201ENST00000579753 87 ntBASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 uc_338.16-201ENST00000621804 95 ntBASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.85□□□□□ -2.27
PTCHD3Q3KNS1 SNORD45B-201ENST00000364617 72 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms