Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 Y_RNA.686-201ENST00000516548 134 ntBASIC0.08□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.08□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.08□□□□□ -2.4
SHROOM1Q2M3G4 RNU1-29P-201ENST00000606574 126 ntBASIC0.08□□□□□ -2.4
SHROOM1Q2M3G4 SNORA9.1-201ENST00000362412 131 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 SNORD18B-201ENST00000365659 72 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-197P-201ENST00000458836 62 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-138P-201ENST00000515952 107 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-861P-201ENST00000516745 106 ntBASIC0.07□□□□□ -2.4
SHROOM1Q2M3G4 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-726P-201ENST00000364680 107 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.785-201ENST00000384290 109 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 MIR206-201ENST00000384872 86 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 MIR548L-201ENST00000408303 86 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 SNORA81.3-201ENST00000517283 198 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 AC138869.1-201ENST00000568623 124 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 MIR4500-201ENST00000579472 76 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 MIR548H5-201ENST00000580314 60 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 AC108081.1-201ENST00000604358 221 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.29-201ENST00000362570 113 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNA5SP403-201ENST00000363598 108 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-48P-201ENST00000458875 63 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-388P-201ENST00000517012 105 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-389P-201ENST00000517048 105 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-161P-201ENST00000517289 62 ntBASIC0.05□□□□□ -2.4
SHROOM1Q2M3G4 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-449P-201ENST00000383914 107 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 HAR1A.1-201ENST00000459583 118 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 RNY4P20-201ENST00000516678 93 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 MIR3121-201ENST00000579680 77 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-10P-201ENST00000607194 63 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 AL137067.1-201ENST00000615933 120 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 AL162376.1-201ENST00000624117 175 ntBASIC0.04□□□□□ -2.4
SHROOM1Q2M3G4 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 MIR519A1-201ENST00000385257 85 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 RNU6-127P-201ENST00000390897 107 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.580-201ENST00000391004 95 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-104P-201ENST00000459398 79 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 RNU7-2P-201ENST00000516096 62 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 AC004792.1-201ENST00000614523 137 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
SHROOM1Q2M3G4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 RNU4-11P-201ENST00000365287 132 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 SNORD41.1-201ENST00000391000 69 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 SNORD77B-201ENST00000391112 67 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 MIR548I2-201ENST00000408348 149 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 MIR1912-201ENST00000410389 80 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 BX276092.1-201ENST00000427368 251 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 RPL39P34-201ENST00000477141 156 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 TRAJ51-201ENST00000504127 63 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 AC074198.2-201ENST00000508153 258 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 AP001362.1-201ENST00000625165 124 ntBASIC0.02□□□□□ -2.41
SHROOM1Q2M3G4 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 SNORD115-35-201ENST00000365122 82 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 MIR635-201ENST00000384830 98 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 RNU6-394P-201ENST00000410735 107 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 IGKV1-22-201ENST00000524313 326 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.01□□□□□ -2.41
SHROOM1Q2M3G4 RNU6-616P-201ENST00000384353 107 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 MIR593-201ENST00000384856 100 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 MT-TI-201ENST00000387365 69 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 AC097635.1-201ENST00000450678 155 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 MIR5706-201ENST00000579841 80 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 AC087741.2-201ENST00000619415 172 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 MIR6086-201ENST00000638065 55 ntBASIC0□□□□□ -2.41
SHROOM1Q2M3G4 RNU6-161P-201ENST00000363051 106 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 SNORD115-19-201ENST00000363098 82 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 SNORD115-18-201ENST00000363293 82 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 SNORD115-17-201ENST00000364612 82 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 RNU6-460P-201ENST00000391158 108 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 AL078595.1-201ENST00000404458 226 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 MIR4743-201ENST00000584576 69 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 SNORA70.25-201ENST00000612741 95 ntBASIC-0.01□□□□□ -2.41
SHROOM1Q2M3G4 MIR376B-201ENST00000614515 100 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms