Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 TUG1_4.1-201ENST00000619464 181 ntBASIC0.45□□□□□ -2.34
NFIL3Q16649 MIR6828-201ENST00000636181 60 ntBASIC0.45□□□□□ -2.34
NFIL3Q16649 SNORD115-19-201ENST00000363098 82 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 SNORD115-18-201ENST00000363293 82 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 SNORD115-17-201ENST00000364612 82 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 SNORD28-201ENST00000384706 75 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 Y_RNA.568-201ENST00000384742 113 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 RNU6-1307P-201ENST00000391012 103 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 MIR1263-201ENST00000408324 86 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 MTND4LP9-201ENST00000427694 174 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 RNA5SP47-201ENST00000517230 109 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 MIR4639-201ENST00000584938 69 ntBASIC0.44□□□□□ -2.34
NFIL3Q16649 Y_RNA.213-201ENST00000364178 111 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 Y_RNA.328-201ENST00000365208 113 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 Y_RNA.343-201ENST00000365354 112 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 RNA5SP268-201ENST00000516828 124 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 SCARNA16.5-201ENST00000517114 183 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 AP001362.1-201ENST00000625165 124 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
NFIL3Q16649 SNORD44.1-201ENST00000363202 61 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 Y_RNA.127-201ENST00000363386 109 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 SNORA63.5-201ENST00000363548 123 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 RNU6-1229P-201ENST00000364295 107 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 MIR759-201ENST00000390224 91 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 RNU6-781P-201ENST00000516377 101 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 MIR4500-201ENST00000579472 76 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 MIR548H5-201ENST00000580314 60 ntBASIC0.42□□□□□ -2.34
NFIL3Q16649 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.42□□□□□ -2.34
NFIL3Q16649 RNU6-209P-201ENST00000384118 107 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 SNORA40-201ENST00000388090 126 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 AC244505.6-201ENST00000452829 130 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 RNU6-346P-201ENST00000516288 111 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 Y_RNA.773-201ENST00000607168 90 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
NFIL3Q16649 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 RNU6-865P-201ENST00000364772 107 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 Y_RNA.528-201ENST00000384575 108 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 RNU6-257P-201ENST00000410238 98 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 SUMO1P3-201ENST00000439961 304 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 AC138869.1-201ENST00000568623 124 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 AC244669.1-204ENST00000621564 178 ntBASIC0.4□□□□□ -2.35
NFIL3Q16649 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.39□□□□□ -2.35
NFIL3Q16649 RNU7-10P-201ENST00000607194 63 ntBASIC0.39□□□□□ -2.35
NFIL3Q16649 MIR376B-201ENST00000614515 100 ntBASIC0.39□□□□□ -2.35
NFIL3Q16649 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
NFIL3Q16649 RNU6-235P-201ENST00000362644 107 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 RNU6-735P-201ENST00000410612 107 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 RNU6-1234P-201ENST00000516877 103 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 MIR7107-201ENST00000611489 80 ntBASIC0.38□□□□□ -2.35
NFIL3Q16649 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
NFIL3Q16649 RNU6-521P-201ENST00000516663 105 ntBASIC0.37□□□□□ -2.35
NFIL3Q16649 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.37□□□□□ -2.35
NFIL3Q16649 SNORD58C-201ENST00000365223 64 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 MIR548D2-201ENST00000384955 97 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 MIR548I2-201ENST00000408348 149 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 SNRPGP12-201ENST00000449481 213 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 AC025166.1-201ENST00000612411 163 ntBASIC0.36□□□□□ -2.35
NFIL3Q16649 Y_RNA.49-201ENST00000362714 112 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 SNORD115-24-201ENST00000363528 82 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 Y_RNA.360-201ENST00000365512 102 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 RNU6-716P-201ENST00000365621 103 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 MIR1255B1-201ENST00000636325 63 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 MIR924-201ENST00000638017 53 ntBASIC0.35□□□□□ -2.35
NFIL3Q16649 Y_RNA.115-201ENST00000363272 98 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 MIR539-201ENST00000365690 78 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 MIR34C-201ENST00000384831 77 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 BX276092.1-201ENST00000427368 251 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 TRAJ51-201ENST00000504127 63 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 RNU6-1061P-201ENST00000516530 99 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
NFIL3Q16649 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
NFIL3Q16649 RNU6-1099P-201ENST00000363533 107 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 RNY4P6-201ENST00000363667 96 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 Y_RNA.586-201ENST00000391146 98 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
NFIL3Q16649 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 MTND5P18-201ENST00000445624 1801 ntBASIC0.33□□□□□ -2.36
NFIL3Q16649 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
NFIL3Q16649 RNU6-1126P-201ENST00000384002 107 ntBASIC0.32□□□□□ -2.36
NFIL3Q16649 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
NFIL3Q16649 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
NFIL3Q16649 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.32□□□□□ -2.36
NFIL3Q16649 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
NFIL3Q16649 RNA5SP403-201ENST00000363598 108 ntBASIC0.31□□□□□ -2.36
NFIL3Q16649 RNU6-571P-201ENST00000384128 107 ntBASIC0.31□□□□□ -2.36
NFIL3Q16649 MIR519A1-201ENST00000385257 85 ntBASIC0.31□□□□□ -2.36
NFIL3Q16649 MT-TR-201ENST00000387439 65 ntBASIC0.31□□□□□ -2.36
NFIL3Q16649 RNU6-1211P-201ENST00000459179 105 ntBASIC0.31□□□□□ -2.36
NFIL3Q16649 RNU7-161P-201ENST00000517289 62 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms