Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR4777-201ENST00000583710 86 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 AC096720.1-201ENST00000604441 183 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 MIR2052-201ENST00000636055 55 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 Y_RNA.95-201ENST00000363079 95 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 Y_RNA.540-201ENST00000384638 111 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 MIR548J-201ENST00000408833 112 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 Y_RNA.659-201ENST00000515994 113 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 MIR548Z-201ENST00000584743 97 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 AC106800.4-201ENST00000614905 153 ntBASIC1.28□□□□□ -2.2
SF3B3Q15393 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.28□□□□□ -2.2
SF3B3Q15393 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
SF3B3Q15393 MIR5582-201ENST00000579697 68 ntBASIC1.27□□□□□ -2.21
SF3B3Q15393 MIR4439-201ENST00000583746 80 ntBASIC1.27□□□□□ -2.21
SF3B3Q15393 MIR6734-201ENST00000621166 68 ntBASIC1.27□□□□□ -2.21
SF3B3Q15393 RNU6-1255P-201ENST00000363434 112 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 RNU4-38P-201ENST00000364472 129 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 RNU1-36P-201ENST00000365130 165 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 MIR488-201ENST00000365739 83 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 Y_RNA.588-201ENST00000391254 102 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 MIR548G-201ENST00000408442 89 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 RNY4P30-201ENST00000410216 95 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 RNU6-1223P-201ENST00000517124 104 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 U6.109-201ENST00000636749 87 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
SF3B3Q15393 HSBP1P2-201ENST00000299671 229 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 RNU6-1163P-201ENST00000364516 107 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 Y_RNA.342-201ENST00000365352 113 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 Y_RNA.369-201ENST00000365568 117 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 SNORD83.1-201ENST00000411362 77 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 AC109327.2-201ENST00000448339 378 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 RNU7-61P-201ENST00000515897 61 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 MIR4491-201ENST00000581087 68 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.25□□□□□ -2.21
SF3B3Q15393 AC023934.1-201ENST00000574529 2389 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 RNA5SP133-201ENST00000363368 119 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 RNU6-934P-201ENST00000365154 107 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 Y_RNA.467-201ENST00000384297 102 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 SNORD38.2-201ENST00000384470 69 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 RNU6-644P-201ENST00000391155 98 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 SNORD93-201ENST00000408813 74 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 RNU7-185P-201ENST00000459215 60 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 RNU6-90P-201ENST00000606352 106 ntBASIC1.24□□□□□ -2.21
SF3B3Q15393 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SF3B3Q15393 Y_RNA.119-201ENST00000363301 96 ntBASIC1.23□□□□□ -2.21
SF3B3Q15393 Y_RNA.173-201ENST00000363776 113 ntBASIC1.23□□□□□ -2.21
SF3B3Q15393 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.23□□□□□ -2.21
SF3B3Q15393 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
SF3B3Q15393 MALAT1.1-201ENST00000618249 95 ntBASIC1.23□□□□□ -2.21
SF3B3Q15393 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SF3B3Q15393 RNU6-1131P-201ENST00000364955 107 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 RNU6-49P-201ENST00000384256 107 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 RNU6-813P-201ENST00000384691 107 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 SPINT5P-201ENST00000448174 155 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 MIR3973-201ENST00000579824 107 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 AC020891.4-201ENST00000605745 93 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
SF3B3Q15393 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SF3B3Q15393 Y_RNA.96-201ENST00000363092 109 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 Y_RNA.290-201ENST00000364879 114 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 Y_RNA.567-201ENST00000384736 106 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 MIR1257-201ENST00000408490 117 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 RPS26P5-201ENST00000418544 335 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 AC015818.7-201ENST00000428754 109 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 AC087499.7-201ENST00000441958 109 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 SNRPGP12-201ENST00000449481 213 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 SNORA25.16-201ENST00000516741 121 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 Y_RNA.705-201ENST00000516862 110 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 MTND5P40-201ENST00000559945 246 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 MIR4771-2-201ENST00000577758 74 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 MIR4771-1-201ENST00000582617 74 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 RNU6-86P-201ENST00000606534 107 ntBASIC1.21□□□□□ -2.22
SF3B3Q15393 RNU6-369P-201ENST00000362515 102 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 RNU6-1244P-201ENST00000363614 108 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 RNU6-531P-201ENST00000516694 104 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 U7.3-201ENST00000616123 62 ntBASIC1.2□□□□□ -2.22
SF3B3Q15393 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SF3B3Q15393 Y_RNA.220-201ENST00000364244 109 ntBASIC1.19□□□□□ -2.22
SF3B3Q15393 MIR125B2-201ENST00000385128 89 ntBASIC1.19□□□□□ -2.22
SF3B3Q15393 RNU6-972P-201ENST00000391208 107 ntBASIC1.19□□□□□ -2.22
SF3B3Q15393 RNU6-887P-201ENST00000410660 100 ntBASIC1.19□□□□□ -2.22
SF3B3Q15393 RNU4-83P-201ENST00000410863 133 ntBASIC1.19□□□□□ -2.22
SF3B3Q15393 RNU6-403P-201ENST00000363163 104 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 RNU4-58P-201ENST00000363192 141 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 RNU6-571P-201ENST00000384128 107 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 RNY1P7-201ENST00000384743 110 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms