Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 RNU7-156P-201ENST00000517214 74 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 RNU6-90P-201ENST00000606352 106 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 MIR8066-201ENST00000617280 78 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 AC091304.10-201ENST00000641554 121 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
IRF9Q00978 RNU6-170P-201ENST00000362832 104 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
IRF9Q00978 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 RNY1P7-201ENST00000384743 110 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 FABP5P4-201ENST00000437203 171 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 SPINT5P-201ENST00000448174 155 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 RNU6-1194P-201ENST00000516208 104 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 RNU6-795P-201ENST00000516323 103 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 MTND5P40-201ENST00000559945 246 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 MIR4804-201ENST00000581683 73 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 MIR548Z-201ENST00000584743 97 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 SNORD92-201ENST00000585078 85 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 AL359821.1-201ENST00000605519 182 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 MIR6082-201ENST00000613604 109 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 AC012531.4-201ENST00000616509 177 ntBASIC1.28□□□□□ -2.2
IRF9Q00978 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
IRF9Q00978 Y_RNA.42-201ENST00000362660 108 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 Y_RNA.95-201ENST00000363079 95 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 RNU6-294P-201ENST00000364999 102 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 RNU6-765P-201ENST00000516916 99 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 MIR4439-201ENST00000583746 80 ntBASIC1.27□□□□□ -2.21
IRF9Q00978 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 Y_RNA.342-201ENST00000365352 113 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 AC004941.2-201ENST00000427009 228 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 RNU7-102P-201ENST00000458948 62 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.26□□□□□ -2.21
IRF9Q00978 TRMT112P2-201ENST00000512910 132 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 MALAT1.1-201ENST00000618249 95 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 MIR2052-201ENST00000636055 55 ntBASIC1.26□□□□□ -2.21
IRF9Q00978 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
IRF9Q00978 MIR337-201ENST00000362281 93 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 MIR520F-201ENST00000384824 87 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 RNU6-644P-201ENST00000391155 98 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 AC109327.2-201ENST00000448339 378 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 SNRPGP12-201ENST00000449481 213 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 RNU7-61P-201ENST00000515897 61 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 RNU6-1110P-201ENST00000516462 101 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 MIR4777-201ENST00000583710 86 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 AL136317.1-201ENST00000612653 226 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
IRF9Q00978 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 Y_RNA.173-201ENST00000363776 113 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 SNORD73B-201ENST00000364394 72 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 RNU6-1163P-201ENST00000364516 107 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 RNU6-571P-201ENST00000384128 107 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 SNORD89-201ENST00000390981 114 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 RNU1-119P-201ENST00000391122 165 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 BX276092.1-201ENST00000427368 251 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 RNU7-56P-201ENST00000458744 62 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 AC013244.2-201ENST00000603396 103 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
IRF9Q00978 Y_RNA.220-201ENST00000364244 109 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 Y_RNA.567-201ENST00000384736 106 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 U7.7-201ENST00000459276 60 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 SNORA72.7-201ENST00000516349 94 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 RNU6-844P-201ENST00000517175 102 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
IRF9Q00978 MIR101-2-201ENST00000362195 79 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 Y_RNA.96-201ENST00000363092 109 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 Y_RNA.290-201ENST00000364879 114 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 Y_RNA.467-201ENST00000384297 102 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
IRF9Q00978 RNU6-762P-201ENST00000517107 102 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 AC008608.1-201ENST00000603910 127 ntBASIC1.22□□□□□ -2.21
IRF9Q00978 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
IRF9Q00978 RNU6-813P-201ENST00000384691 107 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 RNU6-162P-201ENST00000516228 103 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 Y_RNA.697-201ENST00000516776 113 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 RNU6-850P-201ENST00000516934 103 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 AP003327.1-201ENST00000529684 127 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 RNU6-86P-201ENST00000606534 107 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 U7.3-201ENST00000616123 62 ntBASIC1.21□□□□□ -2.22
IRF9Q00978 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
IRF9Q00978 RNU6-1244P-201ENST00000363614 108 ntBASIC1.2□□□□□ -2.22
IRF9Q00978 Y_RNA.558-201ENST00000384685 113 ntBASIC1.2□□□□□ -2.22
IRF9Q00978 SNORD100-201ENST00000408573 76 ntBASIC1.2□□□□□ -2.22
IRF9Q00978 Y_RNA.705-201ENST00000516862 110 ntBASIC1.2□□□□□ -2.22
IRF9Q00978 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
IRF9Q00978 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.2□□□□□ -2.22
IRF9Q00978 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
IRF9Q00978 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
IRF9Q00978 MIR520H-201ENST00000385126 88 ntBASIC1.19□□□□□ -2.22
IRF9Q00978 MIR1302-4-201ENST00000408701 150 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 298.2 ms