Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR604-201ENST00000384880 94 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 SNORD63B-201ENST00000411005 70 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 MTND2P23-201ENST00000422990 651 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 AC097635.1-201ENST00000450678 155 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 MTND1P19-201ENST00000511780 315 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 SNORA25.13-201ENST00000516395 103 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 AC138907.4-201ENST00000570107 226 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 AC021443.1-201ENST00000604478 211 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 MIR6507-201ENST00000613630 70 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 RNU6-509P-201ENST00000363519 107 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 RNY1P11-201ENST00000363759 113 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 RNA5SP25-201ENST00000410815 110 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 SNORD127-201ENST00000458892 86 ntBASIC-0.48□□□□□ -2.49
VSX2P58304 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
VSX2P58304 MIR655-201ENST00000362159 97 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 SNORD49B-201ENST00000365172 72 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 RNU6-524P-201ENST00000384270 107 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 MIR548AG2-201ENST00000581228 64 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 FTX_2.1-201ENST00000618816 94 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 U6.104-201ENST00000637979 90 ntBASIC-0.49□□□□□ -2.49
VSX2P58304 RNU1-141P-201ENST00000364623 158 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 MIR548I2-201ENST00000408348 149 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 MIR548F4-201ENST00000408515 105 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 AC109327.2-201ENST00000448339 378 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 AC011603.4-201ENST00000611325 277 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
VSX2P58304 SNORD27-201ENST00000363981 72 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 RNU6-616P-201ENST00000384353 107 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 RNU6-588P-201ENST00000410281 105 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 RNU7-2P-201ENST00000516096 62 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 RNU7-13P-201ENST00000516413 62 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 MIR3149-201ENST00000584629 83 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 MIR376B-201ENST00000614515 100 ntBASIC-0.51□□□□□ -2.49
VSX2P58304 MIR148A-201ENST00000362215 68 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 U8.6-201ENST00000364939 135 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 MIR519A1-201ENST00000385257 85 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 AC244250.2-201ENST00000418731 148 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 MTND5P40-201ENST00000559945 246 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 MIR4473-201ENST00000583731 91 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 AC044792.1-201ENST00000593294 196 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 AP001362.1-201ENST00000625165 124 ntBASIC-0.52□□□□□ -2.49
VSX2P58304 RNU6-309P-201ENST00000364573 106 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 RNA5SP205-201ENST00000364653 136 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 RNU6-818P-201ENST00000364837 108 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 AL590491.3-201ENST00000610731 82 ntBASIC-0.53□□□□□ -2.49
VSX2P58304 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.54□□□□□ -2.5
VSX2P58304 RNU6-170P-201ENST00000362832 104 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 SNORD115-35-201ENST00000365122 82 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 MIR519E-201ENST00000385075 84 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 RNU6-918P-201ENST00000391219 106 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 AC093423.1-201ENST00000440817 142 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 RNU7-188P-201ENST00000517063 64 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 MIR3681-201ENST00000580089 72 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 AL391099.1-201ENST00000624635 187 ntBASIC-0.54□□□□□ -2.5
VSX2P58304 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.55□□□□□ -2.5
VSX2P58304 SNORD58.1-201ENST00000391313 66 ntBASIC-0.55□□□□□ -2.5
VSX2P58304 MIR4788-201ENST00000639104 80 ntBASIC-0.55□□□□□ -2.5
VSX2P58304 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.56□□□□□ -2.5
VSX2P58304 SNORD95.1-201ENST00000364099 68 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 MIR516A2-201ENST00000384888 90 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 MIR181B2-201ENST00000385004 89 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 MIR516A1-201ENST00000385033 90 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 RNU6-850P-201ENST00000516934 103 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 YWHAEP2-201ENST00000580066 112 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 MIR548AE1-201ENST00000583292 70 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
VSX2P58304 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 RNU6-797P-201ENST00000363101 109 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 RNA5SP368-201ENST00000364298 116 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 RNU6-47P-201ENST00000383866 107 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 MIR34C-201ENST00000384831 77 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms