Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORA75.1-201ENST00000391130 148 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 RNU6-588P-201ENST00000410281 105 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 MTCYBP9-201ENST00000431021 303 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 MIR3920-201ENST00000581751 86 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 AL670379.3-201ENST00000605040 251 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 MIR6514-201ENST00000622549 70 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 AP001362.1-201ENST00000625165 124 ntBASIC-0.35□□□□□ -2.47
PKNOX1P55347 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 MIR548I2-201ENST00000408348 149 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 SNORD63B-201ENST00000411005 70 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 RNU7-195P-201ENST00000458793 62 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 RNU7-2P-201ENST00000516096 62 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 AC009779.6-201ENST00000603972 165 ntBASIC-0.36□□□□□ -2.47
PKNOX1P55347 SNORA63-201ENST00000363450 132 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 RNU6-509P-201ENST00000363519 107 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 RNU6-312P-201ENST00000364629 107 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 SNORD77B-201ENST00000391112 67 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 MIR876-201ENST00000401147 81 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 RNU6-111P-201ENST00000517179 105 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
PKNOX1P55347 MIR6844-201ENST00000637122 62 ntBASIC-0.37□□□□□ -2.47
PKNOX1P55347 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 SNORD114-12-201ENST00000365400 75 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNU6-46P-201ENST00000383860 107 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNU6-616P-201ENST00000384353 107 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNA5SP285-201ENST00000516619 119 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 CR383656.4-201ENST00000546909 122 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 MIR3646-201ENST00000578301 84 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 MIR376B-201ENST00000614515 100 ntBASIC-0.38□□□□□ -2.47
PKNOX1P55347 RNU6-170P-201ENST00000362832 104 ntBASIC-0.39□□□□□ -2.47
PKNOX1P55347 RNU6-309P-201ENST00000364573 106 ntBASIC-0.39□□□□□ -2.47
PKNOX1P55347 MIR106A-201ENST00000384870 81 ntBASIC-0.39□□□□□ -2.47
PKNOX1P55347 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.39□□□□□ -2.47
PKNOX1P55347 SNORA25.13-201ENST00000516395 103 ntBASIC-0.39□□□□□ -2.47
PKNOX1P55347 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.39□□□□□ -2.47
PKNOX1P55347 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 SNORD115-35-201ENST00000365122 82 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 RNU7-13P-201ENST00000516413 62 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 RNY4P20-201ENST00000516678 93 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 IGLVI-20-201ENST00000519296 130 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 AC062037.2-201ENST00000610137 73 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 AC084368.1-201ENST00000620935 65 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.4□□□□□ -2.47
PKNOX1P55347 MIR3658-201ENST00000636291 56 ntBASIC-0.4□□□□□ -2.47
PKNOX1P55347 MIR148A-201ENST00000362215 68 ntBASIC-0.41□□□□□ -2.48
PKNOX1P55347 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.41□□□□□ -2.48
PKNOX1P55347 RNU6-524P-201ENST00000384270 107 ntBASIC-0.41□□□□□ -2.48
PKNOX1P55347 RNU7-106P-201ENST00000459514 67 ntBASIC-0.41□□□□□ -2.48
PKNOX1P55347 MTND5P40-201ENST00000559945 246 ntBASIC-0.41□□□□□ -2.48
PKNOX1P55347 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 AL603914.1-201ENST00000401964 204 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 AC022559.1-201ENST00000520905 205 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 AC108081.1-201ENST00000604358 221 ntBASIC-0.42□□□□□ -2.48
PKNOX1P55347 RNU1-141P-201ENST00000364623 158 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 SNORD18B-201ENST00000365659 72 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 RNU6-571P-201ENST00000384128 107 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 MIR516B1-201ENST00000385211 90 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 RNU6-239P-201ENST00000390990 99 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 MIR1302-3-201ENST00000408128 138 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 AC109327.2-201ENST00000448339 378 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 RNU7-121P-201ENST00000516604 62 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 MIR548AG2-201ENST00000581228 64 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 MIR6759-201ENST00000638110 65 ntBASIC-0.43□□□□□ -2.48
PKNOX1P55347 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 SNORA20.1-201ENST00000364790 130 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 MIR34C-201ENST00000384831 77 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 RNU7-74P-201ENST00000459104 62 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 AL137067.1-201ENST00000615933 120 ntBASIC-0.44□□□□□ -2.48
PKNOX1P55347 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.44□□□□□ -2.48
PKNOX1P55347 SNORD114-28-201ENST00000363610 72 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 RNU4-84P-201ENST00000364200 139 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 RNU6-850P-201ENST00000516934 103 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 MIR4645-201ENST00000583158 77 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 MIR3666-201ENST00000607845 111 ntBASIC-0.45□□□□□ -2.48
PKNOX1P55347 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.46□□□□□ -2.48
PKNOX1P55347 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.46□□□□□ -2.48
PKNOX1P55347 AC093423.1-201ENST00000440817 142 ntBASIC-0.46□□□□□ -2.48
PKNOX1P55347 MIR4802-201ENST00000581881 80 ntBASIC-0.46□□□□□ -2.48
PKNOX1P55347 RN7SL660P-201ENST00000614852 299 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 375.6 ms