Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-426P-201ENST00000516464 97 ntBASIC0.33□□□□□ -2.36
HMGCS2P54868 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
HMGCS2P54868 AC087741.2-201ENST00000619415 172 ntBASIC0.33□□□□□ -2.36
HMGCS2P54868 MIR6828-201ENST00000636181 60 ntBASIC0.33□□□□□ -2.36
HMGCS2P54868 SNORA63.5-201ENST00000363548 123 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 RNU4-67P-201ENST00000364569 141 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 Y_RNA.488-201ENST00000384403 102 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 SNORD28-201ENST00000384706 75 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 AL158147.1-201ENST00000443970 75 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 RNA5SP47-201ENST00000517230 109 ntBASIC0.32□□□□□ -2.36
HMGCS2P54868 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 Y_RNA.448-201ENST00000384185 108 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 Y_RNA.506-201ENST00000384494 102 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 RNU6-429P-201ENST00000384582 108 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 RNU7-48P-201ENST00000458875 63 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 RNU7-2P-201ENST00000516096 62 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 U7.2-201ENST00000607576 63 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 MIR6718-201ENST00000616153 80 ntBASIC0.31□□□□□ -2.36
HMGCS2P54868 Y_RNA.56-201ENST00000362798 112 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNU6-647P-201ENST00000364243 107 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 SNORD115-35-201ENST00000365122 82 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 SNORD77B-201ENST00000391112 67 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNU6-735P-201ENST00000410612 107 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 MTND4LP9-201ENST00000427694 174 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNU6-469P-201ENST00000516253 101 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNU6-781P-201ENST00000516377 101 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNA5SP268-201ENST00000516828 124 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 RNU7-6P-201ENST00000516845 62 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 Y_RNA.773-201ENST00000607168 90 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.3□□□□□ -2.36
HMGCS2P54868 SNORD115-19-201ENST00000363098 82 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 SNORD115-18-201ENST00000363293 82 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 Y_RNA.127-201ENST00000363386 109 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 Y_RNA.198-201ENST00000364013 98 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 SNORD115-17-201ENST00000364612 82 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 MIR548I1-201ENST00000408810 149 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 SUMO1P3-201ENST00000439961 304 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 RNU6-346P-201ENST00000516288 111 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 RNU6-135P-201ENST00000516769 101 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 SCARNA16.5-201ENST00000517114 183 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 MIR4639-201ENST00000584938 69 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 MIR7107-201ENST00000611489 80 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
HMGCS2P54868 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 MIR101-2-201ENST00000362195 79 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 Y_RNA.68-201ENST00000362881 102 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 Y_RNA.98-201ENST00000363109 102 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 Y_RNA.328-201ENST00000365208 113 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 MIR1263-201ENST00000408324 86 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 RNA5SP136-201ENST00000410906 107 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 AC244505.6-201ENST00000452829 130 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 RNU6-1234P-201ENST00000516877 103 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 MIR4500-201ENST00000579472 76 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 MIR376B-201ENST00000614515 100 ntBASIC0.28□□□□□ -2.36
HMGCS2P54868 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 RNY1P5-201ENST00000383890 115 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 Y_RNA.568-201ENST00000384742 113 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 RNU6-257P-201ENST00000410238 98 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 MIR3163-201ENST00000581592 73 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 AP001362.1-201ENST00000625165 124 ntBASIC0.27□□□□□ -2.37
HMGCS2P54868 RNU6-235P-201ENST00000362644 107 ntBASIC0.26□□□□□ -2.37
HMGCS2P54868 TRAJ51-201ENST00000504127 63 ntBASIC0.26□□□□□ -2.37
HMGCS2P54868 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
HMGCS2P54868 TUG1_4.1-201ENST00000619464 181 ntBASIC0.26□□□□□ -2.37
HMGCS2P54868 MIR1255B1-201ENST00000636325 63 ntBASIC0.26□□□□□ -2.37
HMGCS2P54868 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
HMGCS2P54868 RNU6-1229P-201ENST00000364295 107 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 BX276092.1-201ENST00000427368 251 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 AC069271.1-201ENST00000445577 156 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 AC138869.1-201ENST00000568623 124 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 MIR548H5-201ENST00000580314 60 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 MIR3668-201ENST00000582138 75 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 AC091304.10-201ENST00000641554 121 ntBASIC0.25□□□□□ -2.37
HMGCS2P54868 Y_RNA.49-201ENST00000362714 112 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 SNORD115-24-201ENST00000363528 82 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 Y_RNA.528-201ENST00000384575 108 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 MIR34C-201ENST00000384831 77 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 RNU2-59P-201ENST00000410482 191 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 RNU6-521P-201ENST00000516663 105 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 RNU7-161P-201ENST00000517289 62 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
HMGCS2P54868 Y_RNA.213-201ENST00000364178 111 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 RNU6-865P-201ENST00000364772 107 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 SNORD58C-201ENST00000365223 64 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 Y_RNA.360-201ENST00000365512 102 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 SNORA40-201ENST00000388090 126 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 RNA5SP227-201ENST00000516184 113 ntBASIC0.23□□□□□ -2.37
HMGCS2P54868 RNA5SP403-201ENST00000363598 108 ntBASIC0.22□□□□□ -2.37
HMGCS2P54868 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
HMGCS2P54868 Y_RNA.343-201ENST00000365354 112 ntBASIC0.22□□□□□ -2.37
HMGCS2P54868 RNU6-1126P-201ENST00000384002 107 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms