Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU7-48P-201ENST00000458875 63 ntBASIC0.93□□□□□ -2.26
PMS2P54278 RNU6-1194P-201ENST00000516208 104 ntBASIC0.93□□□□□ -2.26
PMS2P54278 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
PMS2P54278 AC138749.4-201ENST00000563970 127 ntBASIC0.93□□□□□ -2.26
PMS2P54278 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
PMS2P54278 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
PMS2P54278 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
PMS2P54278 Y_RNA.377-201ENST00000365644 108 ntBASIC0.92□□□□□ -2.26
PMS2P54278 MIR938-201ENST00000401216 83 ntBASIC0.92□□□□□ -2.26
PMS2P54278 RPL39P25-201ENST00000449384 154 ntBASIC0.92□□□□□ -2.26
PMS2P54278 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
PMS2P54278 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
PMS2P54278 AL136317.1-201ENST00000612653 226 ntBASIC0.92□□□□□ -2.26
PMS2P54278 MIR8066-201ENST00000617280 78 ntBASIC0.92□□□□□ -2.26
PMS2P54278 Y_RNA.42-201ENST00000362660 108 ntBASIC0.91□□□□□ -2.26
PMS2P54278 Y_RNA.155-201ENST00000363632 101 ntBASIC0.91□□□□□ -2.26
PMS2P54278 Y_RNA.360-201ENST00000365512 102 ntBASIC0.91□□□□□ -2.26
PMS2P54278 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
PMS2P54278 SNORA7.5-201ENST00000410672 110 ntBASIC0.91□□□□□ -2.26
PMS2P54278 AL035461.1-201ENST00000421490 332 ntBASIC0.91□□□□□ -2.26
PMS2P54278 RNU6-765P-201ENST00000516916 99 ntBASIC0.91□□□□□ -2.26
PMS2P54278 RNU6-1006P-201ENST00000516998 103 ntBASIC0.91□□□□□ -2.26
PMS2P54278 MIR4694-201ENST00000578534 80 ntBASIC0.91□□□□□ -2.26
PMS2P54278 MIR376B-201ENST00000614515 100 ntBASIC0.91□□□□□ -2.26
PMS2P54278 AP001362.1-201ENST00000625165 124 ntBASIC0.91□□□□□ -2.26
PMS2P54278 Y_RNA.78-201ENST00000362970 110 ntBASIC0.9□□□□□ -2.27
PMS2P54278 RNU6-1099P-201ENST00000363533 107 ntBASIC0.9□□□□□ -2.27
PMS2P54278 Y_RNA.205-201ENST00000364128 113 ntBASIC0.9□□□□□ -2.27
PMS2P54278 RNU6-865P-201ENST00000364772 107 ntBASIC0.9□□□□□ -2.27
PMS2P54278 RNU6-106P-201ENST00000384405 107 ntBASIC0.9□□□□□ -2.27
PMS2P54278 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
PMS2P54278 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
PMS2P54278 RNU4-83P-201ENST00000410863 133 ntBASIC0.9□□□□□ -2.27
PMS2P54278 RNU7-156P-201ENST00000517214 74 ntBASIC0.9□□□□□ -2.27
PMS2P54278 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
PMS2P54278 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.9□□□□□ -2.27
PMS2P54278 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
PMS2P54278 RNY3P2-201ENST00000362918 102 ntBASIC0.89□□□□□ -2.27
PMS2P54278 Y_RNA.119-201ENST00000363301 96 ntBASIC0.89□□□□□ -2.27
PMS2P54278 RNA5SP133-201ENST00000363368 119 ntBASIC0.89□□□□□ -2.27
PMS2P54278 RNU6-1201P-201ENST00000384227 107 ntBASIC0.89□□□□□ -2.27
PMS2P54278 MIR34C-201ENST00000384831 77 ntBASIC0.89□□□□□ -2.27
PMS2P54278 MIR577-201ENST00000385196 96 ntBASIC0.89□□□□□ -2.27
PMS2P54278 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
PMS2P54278 AC015818.7-201ENST00000428754 109 ntBASIC0.89□□□□□ -2.27
PMS2P54278 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
PMS2P54278 AC087499.7-201ENST00000441958 109 ntBASIC0.89□□□□□ -2.27
PMS2P54278 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
PMS2P54278 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
PMS2P54278 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
PMS2P54278 RNU4-58P-201ENST00000363192 141 ntBASIC0.88□□□□□ -2.27
PMS2P54278 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PMS2P54278 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
PMS2P54278 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
PMS2P54278 AL442128.1-201ENST00000615151 90 ntBASIC0.88□□□□□ -2.27
PMS2P54278 U6.109-201ENST00000636749 87 ntBASIC0.88□□□□□ -2.27
PMS2P54278 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
PMS2P54278 Y_RNA.13-201ENST00000362403 112 ntBASIC0.87□□□□□ -2.27
PMS2P54278 RNU6-832P-201ENST00000363319 107 ntBASIC0.87□□□□□ -2.27
PMS2P54278 Y_RNA.163-201ENST00000363702 113 ntBASIC0.87□□□□□ -2.27
PMS2P54278 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
PMS2P54278 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
PMS2P54278 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
PMS2P54278 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
PMS2P54278 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
PMS2P54278 SNORA25.16-201ENST00000516741 121 ntBASIC0.87□□□□□ -2.27
PMS2P54278 AP003327.1-201ENST00000529684 127 ntBASIC0.87□□□□□ -2.27
PMS2P54278 AL512310.12-203ENST00000640543 90 ntBASIC0.87□□□□□ -2.27
PMS2P54278 RNU6-403P-201ENST00000363163 104 ntBASIC0.86□□□□□ -2.27
PMS2P54278 SNORD38.1-201ENST00000363863 68 ntBASIC0.86□□□□□ -2.27
PMS2P54278 RNU6-364P-201ENST00000384387 107 ntBASIC0.86□□□□□ -2.27
PMS2P54278 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PMS2P54278 MIR1302-5-201ENST00000408164 150 ntBASIC0.86□□□□□ -2.27
PMS2P54278 RNU6-554P-201ENST00000410466 106 ntBASIC0.86□□□□□ -2.27
PMS2P54278 RNU7-102P-201ENST00000458948 62 ntBASIC0.86□□□□□ -2.27
PMS2P54278 AC090897.1-201ENST00000580909 226 ntBASIC0.86□□□□□ -2.27
PMS2P54278 RNU6-44P-201ENST00000384045 107 ntBASIC0.85□□□□□ -2.27
PMS2P54278 SNORD38.2-201ENST00000384470 69 ntBASIC0.85□□□□□ -2.27
PMS2P54278 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
PMS2P54278 MIR520F-201ENST00000384824 87 ntBASIC0.85□□□□□ -2.27
PMS2P54278 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
PMS2P54278 RNU6-904P-201ENST00000516206 101 ntBASIC0.85□□□□□ -2.27
PMS2P54278 RNU6-531P-201ENST00000516694 104 ntBASIC0.85□□□□□ -2.27
PMS2P54278 RNU6-537P-201ENST00000517277 103 ntBASIC0.85□□□□□ -2.27
PMS2P54278 AC141557.1-201ENST00000540982 400 ntBASIC0.85□□□□□ -2.27
PMS2P54278 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
PMS2P54278 AC008608.1-201ENST00000603910 127 ntBASIC0.85□□□□□ -2.27
PMS2P54278 Y_RNA.10-201ENST00000362371 110 ntBASIC0.84□□□□□ -2.27
PMS2P54278 Y_RNA.81-201ENST00000362997 102 ntBASIC0.84□□□□□ -2.27
PMS2P54278 RNU6-1113P-201ENST00000384348 107 ntBASIC0.84□□□□□ -2.27
PMS2P54278 DEFB131E-201ENST00000532329 154 ntBASIC0.84□□□□□ -2.27
PMS2P54278 MIR3613-201ENST00000579844 87 ntBASIC0.84□□□□□ -2.27
PMS2P54278 RNU6-766P-201ENST00000362478 107 ntBASIC0.83□□□□□ -2.28
PMS2P54278 Y_RNA.173-201ENST00000363776 113 ntBASIC0.83□□□□□ -2.28
PMS2P54278 Y_RNA.247-201ENST00000364500 92 ntBASIC0.83□□□□□ -2.28
PMS2P54278 RNU6-571P-201ENST00000384128 107 ntBASIC0.83□□□□□ -2.28
PMS2P54278 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
PMS2P54278 Y_RNA.601-201ENST00000410500 113 ntBASIC0.83□□□□□ -2.28
PMS2P54278 SNRPGP12-201ENST00000449481 213 ntBASIC0.83□□□□□ -2.28
PMS2P54278 RNU6-448P-201ENST00000517052 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms