Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 Y_RNA.448-201ENST00000384185 108 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RNU6-106P-201ENST00000384405 107 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RNU7-56P-201ENST00000458744 62 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RNU7-48P-201ENST00000458875 63 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 Y_RNA.49-201ENST00000362714 112 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 Y_RNA.360-201ENST00000365512 102 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 RNU6-1201P-201ENST00000384227 107 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 MIR34C-201ENST00000384831 77 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 MIR605-201ENST00000385078 83 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 MIR577-201ENST00000385196 96 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 MIR1257-201ENST00000408490 117 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.84□□□□□ -2.27
CLCN3P51790 RNU6-765P-201ENST00000516916 99 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 MIR4694-201ENST00000578534 80 ntBASIC0.84□□□□□ -2.27
CLCN3P51790 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CLCN3P51790 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 Y_RNA.98-201ENST00000363109 102 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 RNU6-409P-201ENST00000384114 104 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 Y_RNA.507-201ENST00000384500 99 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 SNORD93-201ENST00000408813 74 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 RNU6-733P-201ENST00000410759 104 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 AL035461.1-201ENST00000421490 332 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.83□□□□□ -2.28
CLCN3P51790 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 RNU6-1194P-201ENST00000516208 104 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 RNU6-537P-201ENST00000517277 103 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 AL353765.1-201ENST00000605514 183 ntBASIC0.83□□□□□ -2.28
CLCN3P51790 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLCN3P51790 Y_RNA.78-201ENST00000362970 110 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 RNA5SP133-201ENST00000363368 119 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 RNU6-1099P-201ENST00000363533 107 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLCN3P51790 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 MIR938-201ENST00000401216 83 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 RNU6-554P-201ENST00000410466 106 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 SNORA7.5-201ENST00000410672 110 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 RNU4-83P-201ENST00000410863 133 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 SNORA25.16-201ENST00000516741 121 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 MIR3613-201ENST00000579844 87 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 AC008608.1-201ENST00000603910 127 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 MIR6082-201ENST00000613604 109 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 AP001362.1-201ENST00000625165 124 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
CLCN3P51790 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLCN3P51790 RNY3P2-201ENST00000362918 102 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 Y_RNA.163-201ENST00000363702 113 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 Y_RNA.247-201ENST00000364500 92 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 SNORD105-201ENST00000386910 85 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 RPL39P25-201ENST00000449384 154 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.81□□□□□ -2.28
CLCN3P51790 PVT1_3.1-201ENST00000620853 95 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 U6.109-201ENST00000636749 87 ntBASIC0.81□□□□□ -2.28
CLCN3P51790 Y_RNA.13-201ENST00000362403 112 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 Y_RNA.119-201ENST00000363301 96 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 Y_RNA.155-201ENST00000363632 101 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 RNU6-904P-201ENST00000516206 101 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 RNU7-156P-201ENST00000517214 74 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 AP003327.1-201ENST00000529684 127 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 AC090897.1-201ENST00000580909 226 ntBASIC0.8□□□□□ -2.28
CLCN3P51790 RNU6-832P-201ENST00000363319 107 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 RNU6-865P-201ENST00000364772 107 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 RNU6-44P-201ENST00000384045 107 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 SNRPGP12-201ENST00000449481 213 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 RNU6-977P-201ENST00000516411 103 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 uc_338.28-201ENST00000612082 187 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 AL442128.1-201ENST00000615151 90 ntBASIC0.79□□□□□ -2.28
CLCN3P51790 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CLCN3P51790 Y_RNA.81-201ENST00000362997 102 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 RNU4-58P-201ENST00000363192 141 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 Y_RNA.173-201ENST00000363776 113 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 SNORD38.1-201ENST00000363863 68 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 MIR520F-201ENST00000384824 87 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 SNORA19.1-201ENST00000410656 129 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
CLCN3P51790 RNU6-766P-201ENST00000362478 107 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 SNORA63.4-201ENST00000362763 126 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 RNU6-403P-201ENST00000363163 104 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 Y_RNA.466-201ENST00000384294 113 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 SNORD100-201ENST00000408573 76 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 AL512310.12-203ENST00000640543 90 ntBASIC0.76□□□□□ -2.29
CLCN3P51790 RNU6-571P-201ENST00000384128 107 ntBASIC0.75□□□□□ -2.29
CLCN3P51790 RNU6-364P-201ENST00000384387 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms