Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD92-201ENST00000585078 85 ntBASIC0.78□□□□□ -2.28
CLK1P49759 MIR6082-201ENST00000613604 109 ntBASIC0.78□□□□□ -2.28
CLK1P49759 Y_RNA.119-201ENST00000363301 96 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.77□□□□□ -2.29
CLK1P49759 AC090897.1-201ENST00000580909 226 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AC008608.1-201ENST00000603910 127 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AL442128.1-201ENST00000615151 90 ntBASIC0.77□□□□□ -2.29
CLK1P49759 RMST_2.1-201ENST00000617263 136 ntBASIC0.77□□□□□ -2.29
CLK1P49759 AL512310.12-203ENST00000640543 90 ntBASIC0.77□□□□□ -2.29
CLK1P49759 Y_RNA.13-201ENST00000362403 112 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU6-766P-201ENST00000362478 107 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
CLK1P49759 MIR590-201ENST00000385008 97 ntBASIC0.76□□□□□ -2.29
CLK1P49759 MIR1302-5-201ENST00000408164 150 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.76□□□□□ -2.29
CLK1P49759 AL031737.1-201ENST00000450125 223 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU6-531P-201ENST00000516694 104 ntBASIC0.76□□□□□ -2.29
CLK1P49759 RNU7-156P-201ENST00000517214 74 ntBASIC0.76□□□□□ -2.29
CLK1P49759 AC141557.1-201ENST00000540982 400 ntBASIC0.76□□□□□ -2.29
CLK1P49759 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
CLK1P49759 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU6-403P-201ENST00000363163 104 ntBASIC0.75□□□□□ -2.29
CLK1P49759 SNORD38.1-201ENST00000363863 68 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU6-756P-201ENST00000383997 107 ntBASIC0.75□□□□□ -2.29
CLK1P49759 SNORA51.5-201ENST00000384126 131 ntBASIC0.75□□□□□ -2.29
CLK1P49759 MIR938-201ENST00000401216 83 ntBASIC0.75□□□□□ -2.29
CLK1P49759 SNRPGP12-201ENST00000449481 213 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU7-102P-201ENST00000458948 62 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU6-977P-201ENST00000516411 103 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU6-1110P-201ENST00000516462 101 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU6-765P-201ENST00000516916 99 ntBASIC0.75□□□□□ -2.29
CLK1P49759 AC091304.10-201ENST00000641554 121 ntBASIC0.75□□□□□ -2.29
CLK1P49759 RNU1-93P-201ENST00000364704 169 ntBASIC0.74□□□□□ -2.29
CLK1P49759 SNORA72.6-201ENST00000384520 129 ntBASIC0.74□□□□□ -2.29
CLK1P49759 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
CLK1P49759 MIR1276-201ENST00000408707 83 ntBASIC0.74□□□□□ -2.29
CLK1P49759 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
CLK1P49759 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
CLK1P49759 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
CLK1P49759 RNU6-1194P-201ENST00000516208 104 ntBASIC0.74□□□□□ -2.29
CLK1P49759 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
CLK1P49759 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.74□□□□□ -2.29
CLK1P49759 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLK1P49759 Y_RNA.466-201ENST00000384294 113 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR520F-201ENST00000384824 87 ntBASIC0.73□□□□□ -2.29
CLK1P49759 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
CLK1P49759 RNU6-109P-201ENST00000516364 107 ntBASIC0.73□□□□□ -2.29
CLK1P49759 RNU6-184P-201ENST00000516514 107 ntBASIC0.73□□□□□ -2.29
CLK1P49759 DEFB131E-201ENST00000532329 154 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR548Z-201ENST00000584743 97 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR6504-201ENST00000613520 61 ntBASIC0.73□□□□□ -2.29
CLK1P49759 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
CLK1P49759 RNU4-58P-201ENST00000363192 141 ntBASIC0.72□□□□□ -2.29
CLK1P49759 SNORD114-27-201ENST00000363766 70 ntBASIC0.72□□□□□ -2.29
CLK1P49759 Y_RNA.173-201ENST00000363776 113 ntBASIC0.72□□□□□ -2.29
CLK1P49759 RNU4-36P-201ENST00000364294 144 ntBASIC0.72□□□□□ -2.29
CLK1P49759 RNU6-1163P-201ENST00000364516 107 ntBASIC0.72□□□□□ -2.29
CLK1P49759 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
CLK1P49759 MIR548G-201ENST00000408442 89 ntBASIC0.72□□□□□ -2.29
CLK1P49759 Y_RNA.601-201ENST00000410500 113 ntBASIC0.72□□□□□ -2.29
CLK1P49759 MIR4777-201ENST00000583710 86 ntBASIC0.72□□□□□ -2.29
CLK1P49759 AL136317.1-201ENST00000612653 226 ntBASIC0.72□□□□□ -2.29
CLK1P49759 AC012531.4-201ENST00000616509 177 ntBASIC0.72□□□□□ -2.29
CLK1P49759 Y_RNA.818-201ENST00000618813 71 ntBASIC0.72□□□□□ -2.29
CLK1P49759 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
CLK1P49759 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CLK1P49759 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
CLK1P49759 Y_RNA.4-201ENST00000362333 112 ntBASIC0.71□□□□□ -2.3
CLK1P49759 RNU6-170P-201ENST00000362832 104 ntBASIC0.71□□□□□ -2.3
CLK1P49759 Y_RNA.95-201ENST00000363079 95 ntBASIC0.71□□□□□ -2.3
CLK1P49759 RNU6-1113P-201ENST00000384348 107 ntBASIC0.71□□□□□ -2.3
CLK1P49759 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
CLK1P49759 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.3
CLK1P49759 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
CLK1P49759 SCARNA23-201ENST00000516060 130 ntBASIC0.71□□□□□ -2.3
CLK1P49759 RNU6-795P-201ENST00000516323 103 ntBASIC0.71□□□□□ -2.3
CLK1P49759 AP003327.1-201ENST00000529684 127 ntBASIC0.71□□□□□ -2.3
CLK1P49759 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.71□□□□□ -2.3
CLK1P49759 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
CLK1P49759 Y_RNA.10-201ENST00000362371 110 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU6-1244P-201ENST00000363614 108 ntBASIC0.7□□□□□ -2.3
CLK1P49759 Y_RNA.348-201ENST00000365403 103 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU6-571P-201ENST00000384128 107 ntBASIC0.7□□□□□ -2.3
CLK1P49759 Y_RNA.495-201ENST00000384435 112 ntBASIC0.7□□□□□ -2.3
CLK1P49759 SNORD38.2-201ENST00000384470 69 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU6-291P-201ENST00000384720 107 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU1-119P-201ENST00000391122 165 ntBASIC0.7□□□□□ -2.3
CLK1P49759 SNORD100-201ENST00000408573 76 ntBASIC0.7□□□□□ -2.3
CLK1P49759 AC109327.2-201ENST00000448339 378 ntBASIC0.7□□□□□ -2.3
CLK1P49759 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.7□□□□□ -2.3
CLK1P49759 Y_RNA.659-201ENST00000515994 113 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU6-850P-201ENST00000516934 103 ntBASIC0.7□□□□□ -2.3
CLK1P49759 RNU6-158P-201ENST00000517104 100 ntBASIC0.7□□□□□ -2.3
CLK1P49759 MIR8070-201ENST00000616510 88 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms