Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 MIR4694-201ENST00000578534 80 ntBASIC0.9□□□□□ -2.27
VPS41P49754 RNU6-1099P-201ENST00000363533 107 ntBASIC0.89□□□□□ -2.27
VPS41P49754 RNU6-106P-201ENST00000384405 107 ntBASIC0.89□□□□□ -2.27
VPS41P49754 RNU6-919P-201ENST00000516731 104 ntBASIC0.89□□□□□ -2.27
VPS41P49754 AP003327.1-201ENST00000529684 127 ntBASIC0.89□□□□□ -2.27
VPS41P49754 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
VPS41P49754 AL442128.1-201ENST00000615151 90 ntBASIC0.89□□□□□ -2.27
VPS41P49754 AL512310.12-203ENST00000640543 90 ntBASIC0.89□□□□□ -2.27
VPS41P49754 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
VPS41P49754 RNU6-755P-201ENST00000364400 103 ntBASIC0.88□□□□□ -2.27
VPS41P49754 DEFB131E-201ENST00000532329 154 ntBASIC0.88□□□□□ -2.27
VPS41P49754 MIR3613-201ENST00000579844 87 ntBASIC0.88□□□□□ -2.27
VPS41P49754 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS41P49754 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
VPS41P49754 RNY3P2-201ENST00000362918 102 ntBASIC0.87□□□□□ -2.27
VPS41P49754 RNU6-832P-201ENST00000363319 107 ntBASIC0.87□□□□□ -2.27
VPS41P49754 Y_RNA.163-201ENST00000363702 113 ntBASIC0.87□□□□□ -2.27
VPS41P49754 SNORD114-27-201ENST00000363766 70 ntBASIC0.87□□□□□ -2.27
VPS41P49754 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
VPS41P49754 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VPS41P49754 MIR573-201ENST00000384964 99 ntBASIC0.87□□□□□ -2.27
VPS41P49754 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
VPS41P49754 SNORD100-201ENST00000408573 76 ntBASIC0.87□□□□□ -2.27
VPS41P49754 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
VPS41P49754 RNU6-554P-201ENST00000410466 106 ntBASIC0.87□□□□□ -2.27
VPS41P49754 RNU6-448P-201ENST00000517052 107 ntBASIC0.87□□□□□ -2.27
VPS41P49754 MIR4500-201ENST00000579472 76 ntBASIC0.87□□□□□ -2.27
VPS41P49754 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
VPS41P49754 SNORD38.1-201ENST00000363863 68 ntBASIC0.86□□□□□ -2.27
VPS41P49754 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
VPS41P49754 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
VPS41P49754 AL035461.1-201ENST00000421490 332 ntBASIC0.86□□□□□ -2.27
VPS41P49754 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
VPS41P49754 SNRPGP12-201ENST00000449481 213 ntBASIC0.86□□□□□ -2.27
VPS41P49754 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
VPS41P49754 uc_338.28-201ENST00000612082 187 ntBASIC0.86□□□□□ -2.27
VPS41P49754 Y_RNA.78-201ENST00000362970 110 ntBASIC0.85□□□□□ -2.27
VPS41P49754 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
VPS41P49754 AC002350.1-201ENST00000490759 375 ntBASIC0.85□□□□□ -2.27
VPS41P49754 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
VPS41P49754 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
VPS41P49754 SNORA19.1-201ENST00000410656 129 ntBASIC0.84□□□□□ -2.27
VPS41P49754 BX276092.1-201ENST00000427368 251 ntBASIC0.84□□□□□ -2.27
VPS41P49754 RNU6-904P-201ENST00000516206 101 ntBASIC0.84□□□□□ -2.27
VPS41P49754 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
VPS41P49754 RNU6-537P-201ENST00000517277 103 ntBASIC0.84□□□□□ -2.27
VPS41P49754 AC141557.1-201ENST00000540982 400 ntBASIC0.84□□□□□ -2.27
VPS41P49754 uc_338.16-201ENST00000621804 95 ntBASIC0.84□□□□□ -2.27
VPS41P49754 Y_RNA.56-201ENST00000362798 112 ntBASIC0.83□□□□□ -2.28
VPS41P49754 Y_RNA.173-201ENST00000363776 113 ntBASIC0.83□□□□□ -2.28
VPS41P49754 RNU6-44P-201ENST00000384045 107 ntBASIC0.83□□□□□ -2.28
VPS41P49754 RNU6-571P-201ENST00000384128 107 ntBASIC0.83□□□□□ -2.28
VPS41P49754 SNORD38.2-201ENST00000384470 69 ntBASIC0.83□□□□□ -2.28
VPS41P49754 MIR548G-201ENST00000408442 89 ntBASIC0.83□□□□□ -2.28
VPS41P49754 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
VPS41P49754 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
VPS41P49754 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS41P49754 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS41P49754 SNORA63.4-201ENST00000362763 126 ntBASIC0.82□□□□□ -2.28
VPS41P49754 MIR1302-5-201ENST00000408164 150 ntBASIC0.82□□□□□ -2.28
VPS41P49754 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
VPS41P49754 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
VPS41P49754 MIR3612-201ENST00000579753 87 ntBASIC0.82□□□□□ -2.28
VPS41P49754 Y_RNA.32-201ENST00000362589 110 ntBASIC0.81□□□□□ -2.28
VPS41P49754 Y_RNA.164-201ENST00000363709 102 ntBASIC0.81□□□□□ -2.28
VPS41P49754 RNA5SP245-201ENST00000364239 121 ntBASIC0.81□□□□□ -2.28
VPS41P49754 RNU6-535P-201ENST00000384722 107 ntBASIC0.81□□□□□ -2.28
VPS41P49754 SNORA31.14-201ENST00000516728 116 ntBASIC0.81□□□□□ -2.28
VPS41P49754 RNU6-90P-201ENST00000606352 106 ntBASIC0.81□□□□□ -2.28
VPS41P49754 MIR101-2-201ENST00000362195 79 ntBASIC0.8□□□□□ -2.28
VPS41P49754 RNU6-1163P-201ENST00000364516 107 ntBASIC0.8□□□□□ -2.28
VPS41P49754 SNORA25.9-201ENST00000365087 128 ntBASIC0.8□□□□□ -2.28
VPS41P49754 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS41P49754 RNU6-850P-201ENST00000516934 103 ntBASIC0.8□□□□□ -2.28
VPS41P49754 AC096720.1-201ENST00000604441 183 ntBASIC0.8□□□□□ -2.28
VPS41P49754 AC091304.10-201ENST00000641554 121 ntBASIC0.8□□□□□ -2.28
VPS41P49754 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS41P49754 Y_RNA.4-201ENST00000362333 112 ntBASIC0.79□□□□□ -2.28
VPS41P49754 RNU6-766P-201ENST00000362478 107 ntBASIC0.79□□□□□ -2.28
VPS41P49754 RNU4-36P-201ENST00000364294 144 ntBASIC0.79□□□□□ -2.28
VPS41P49754 MIR590-201ENST00000385008 97 ntBASIC0.79□□□□□ -2.28
VPS41P49754 Y_RNA.601-201ENST00000410500 113 ntBASIC0.79□□□□□ -2.28
VPS41P49754 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
VPS41P49754 AC092628.1-201ENST00000436250 252 ntBASIC0.79□□□□□ -2.28
VPS41P49754 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS41P49754 SPINT5P-201ENST00000448174 155 ntBASIC0.79□□□□□ -2.28
VPS41P49754 TRAJ51-201ENST00000504127 63 ntBASIC0.79□□□□□ -2.28
VPS41P49754 MTND5P40-201ENST00000559945 246 ntBASIC0.79□□□□□ -2.28
VPS41P49754 MIR548H5-201ENST00000580314 60 ntBASIC0.79□□□□□ -2.28
VPS41P49754 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.79□□□□□ -2.28
VPS41P49754 MIR18A-201ENST00000362310 71 ntBASIC0.78□□□□□ -2.28
VPS41P49754 RNU6-170P-201ENST00000362832 104 ntBASIC0.78□□□□□ -2.28
VPS41P49754 Y_RNA.174-201ENST00000363781 105 ntBASIC0.78□□□□□ -2.28
VPS41P49754 SNORA51.5-201ENST00000384126 131 ntBASIC0.78□□□□□ -2.28
VPS41P49754 MIR519A1-201ENST00000385257 85 ntBASIC0.78□□□□□ -2.28
VPS41P49754 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
VPS41P49754 Y_RNA.10-201ENST00000362371 110 ntBASIC0.77□□□□□ -2.29
VPS41P49754 RNA5SP117-201ENST00000365294 118 ntBASIC0.77□□□□□ -2.29
VPS41P49754 Y_RNA.342-201ENST00000365352 113 ntBASIC0.77□□□□□ -2.29
VPS41P49754 RNU6-756P-201ENST00000383997 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms