Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RNU6-1307P-201ENST00000391012 103 ntBASIC0.56□□□□□ -2.32
PRIM2P49643 U6.95-201ENST00000636931 70 ntBASIC0.56□□□□□ -2.32
PRIM2P49643 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PRIM2P49643 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
PRIM2P49643 RNU6-363P-201ENST00000362895 105 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 RNU4-67P-201ENST00000364569 141 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 MIR1287-201ENST00000408492 90 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 AC244505.6-201ENST00000452829 130 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 RNU7-107P-201ENST00000459121 61 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 SCARNA16.5-201ENST00000517114 183 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 MIR1255B1-201ENST00000636325 63 ntBASIC0.55□□□□□ -2.32
PRIM2P49643 RNU6-1099P-201ENST00000363533 107 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 RNU6-571P-201ENST00000384128 107 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 RNU6-187P-201ENST00000384139 106 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 RNA5SP47-201ENST00000517230 109 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 MIR3914-2-201ENST00000637339 95 ntBASIC0.54□□□□□ -2.32
PRIM2P49643 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.54□□□□□ -2.32
PRIM2P49643 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
PRIM2P49643 SNORA63.5-201ENST00000363548 123 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 RNU6-409P-201ENST00000384114 104 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 MIR34C-201ENST00000384831 77 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 MIR1912-201ENST00000410389 80 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 Y_RNA.630-201ENST00000411370 108 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 TMSB4XP3-201ENST00000445144 114 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 RNU6-1018P-201ENST00000516577 106 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 RNA5SP268-201ENST00000516828 124 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 AC091304.10-201ENST00000641554 121 ntBASIC0.53□□□□□ -2.32
PRIM2P49643 Y_RNA.71-201ENST00000362892 104 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 Y_RNA.344-201ENST00000365381 112 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 SNORA7.5-201ENST00000410672 110 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 RPL39P34-201ENST00000477141 156 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 RNU6-659P-201ENST00000516454 104 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 MIR4679-2-201ENST00000578358 77 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 AL512310.12-203ENST00000640543 90 ntBASIC0.52□□□□□ -2.33
PRIM2P49643 RNU6-1313P-201ENST00000362622 102 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 Y_RNA.218-201ENST00000364218 104 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 SNORD116-14-201ENST00000383894 92 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 SNORD116-17-201ENST00000383929 92 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 SNORD116-15-201ENST00000384445 92 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 SNORD116-19-201ENST00000384729 92 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 RNA5SP247-201ENST00000411181 105 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 AC244669.1-204ENST00000621564 178 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 AL162726.3-218ENST00000636401 95 ntBASIC0.51□□□□□ -2.33
PRIM2P49643 RNU6-170P-201ENST00000362832 104 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 Y_RNA.85-201ENST00000363014 111 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 Y_RNA.155-201ENST00000363632 101 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 Y_RNA.362-201ENST00000365518 110 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 MIR519A1-201ENST00000385257 85 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 BX276092.1-201ENST00000427368 251 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 AC097635.1-201ENST00000450678 155 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 RNA5SP227-201ENST00000516184 113 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 AL078603.1-201ENST00000603824 313 ntBASIC0.5□□□□□ -2.33
PRIM2P49643 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 SNORD115-24-201ENST00000363528 82 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 RNU6-816P-201ENST00000390914 107 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 RNU6-1268P-201ENST00000391214 107 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 RNU6-1239P-201ENST00000391310 107 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 SNRPGP12-201ENST00000449481 213 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 Y_RNA.649-201ENST00000459077 103 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
PRIM2P49643 Y_RNA.116-201ENST00000363292 103 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 Y_RNA.309-201ENST00000365046 111 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 RNU6-959P-201ENST00000384671 107 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 SUMO1P3-201ENST00000439961 304 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
PRIM2P49643 TRAJ51-201ENST00000504127 63 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 RNA5SP220-201ENST00000516298 104 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 MTND5P40-201ENST00000559945 246 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 AC007012.1-201ENST00000567192 175 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
PRIM2P49643 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
PRIM2P49643 Y_RNA.49-201ENST00000362714 112 ntBASIC0.47□□□□□ -2.33
PRIM2P49643 SNORD38.1-201ENST00000363863 68 ntBASIC0.47□□□□□ -2.33
PRIM2P49643 RNU6-81P-201ENST00000365608 104 ntBASIC0.47□□□□□ -2.33
PRIM2P49643 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
PRIM2P49643 MIR518E-201ENST00000385252 88 ntBASIC0.46□□□□□ -2.34
PRIM2P49643 MIR548A3-201ENST00000385297 97 ntBASIC0.46□□□□□ -2.34
PRIM2P49643 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.46□□□□□ -2.34
PRIM2P49643 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 Y_RNA.342-201ENST00000365352 113 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 Y_RNA.525-201ENST00000384570 113 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 MIR599-201ENST00000385069 95 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
PRIM2P49643 SNORD63B-201ENST00000411005 70 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms