Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-521P-201ENST00000516663 105 ntBASIC0.54□□□□□ -2.32
NKX2-1P43699 RNU6-531P-201ENST00000516694 104 ntBASIC0.54□□□□□ -2.32
NKX2-1P43699 RNU6-1223P-201ENST00000517124 104 ntBASIC0.54□□□□□ -2.32
NKX2-1P43699 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
NKX2-1P43699 U6.109-201ENST00000636749 87 ntBASIC0.54□□□□□ -2.32
NKX2-1P43699 SNORD114-26-201ENST00000363543 72 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNU4-67P-201ENST00000364569 141 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNA5SP205-201ENST00000364653 136 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 Y_RNA.360-201ENST00000365512 102 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 Y_RNA.362-201ENST00000365518 110 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNU6-22P-201ENST00000384355 107 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNU6-1168P-201ENST00000390831 104 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNU6-1307P-201ENST00000391012 103 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
NKX2-1P43699 AC244505.6-201ENST00000452829 130 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 MIR548H5-201ENST00000580314 60 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 MIR376B-201ENST00000614515 100 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 AC105081.1-201ENST00000617727 106 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 AL162726.3-218ENST00000636401 95 ntBASIC0.53□□□□□ -2.32
NKX2-1P43699 RNU6-865P-201ENST00000364772 107 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 SNORD114-22-201ENST00000365423 72 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 Y_RNA.377-201ENST00000365644 108 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 RNU6-571P-201ENST00000384128 107 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 MIR520E-201ENST00000384867 87 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 Y_RNA.649-201ENST00000459077 103 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 RNU6-62P-201ENST00000516526 102 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 RNU6-1006P-201ENST00000516998 103 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 AC007012.1-201ENST00000567192 175 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 MIR3678-201ENST00000578455 94 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.52□□□□□ -2.33
NKX2-1P43699 AL670379.3-201ENST00000605040 251 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 MIR1255B1-201ENST00000636325 63 ntBASIC0.52□□□□□ -2.33
NKX2-1P43699 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
NKX2-1P43699 Y_RNA.309-201ENST00000365046 111 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 RNU6-409P-201ENST00000384114 104 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 Y_RNA.507-201ENST00000384500 99 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 RNU6-1333P-201ENST00000516162 93 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 SNORA31.14-201ENST00000516728 116 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 Y_RNA.697-201ENST00000516776 113 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 AC138869.1-201ENST00000568623 124 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 MIR4639-201ENST00000584938 69 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 MIR6788-201ENST00000618842 66 ntBASIC0.51□□□□□ -2.33
NKX2-1P43699 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 SNORD38.2-201ENST00000384470 69 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 SNORA72.6-201ENST00000384520 129 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 MIR489-201ENST00000384923 84 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 RNU6-679P-201ENST00000391003 106 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 AL353813.1-201ENST00000440700 253 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 SNRPGP12-201ENST00000449481 213 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 RPS29P1-201ENST00000465274 159 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 DEFB131E-201ENST00000532329 154 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 MTND5P34-201ENST00000568888 325 ntBASIC0.5□□□□□ -2.33
NKX2-1P43699 MIR101-2-201ENST00000362195 79 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 Y_RNA.32-201ENST00000362589 110 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 SNORD38.1-201ENST00000363863 68 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 Y_RNA.525-201ENST00000384570 113 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 MIR34C-201ENST00000384831 77 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 MIR548A3-201ENST00000385297 97 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 RNA5SP47-201ENST00000517230 109 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 CYP3A137P-201ENST00000562436 69 ntBASIC0.49□□□□□ -2.33
NKX2-1P43699 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 SNORD28-201ENST00000384706 75 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 MIR635-201ENST00000384830 98 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 MIR216A-201ENST00000385063 110 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 MIR4500-201ENST00000579472 76 ntBASIC0.48□□□□□ -2.33
NKX2-1P43699 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
NKX2-1P43699 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
NKX2-1P43699 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
NKX2-1P43699 Y_RNA.35-201ENST00000362601 101 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 Y_RNA.323-201ENST00000365157 109 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-816P-201ENST00000390914 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-1268P-201ENST00000391214 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-1239P-201ENST00000391310 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-848P-201ENST00000515948 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-617P-201ENST00000516147 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-473P-201ENST00000516164 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 SNORD33.1-201ENST00000516213 88 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-1049P-201ENST00000516414 107 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 RNU6-412P-201ENST00000516434 106 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 AC068339.1-201ENST00000526965 141 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 MIR4694-201ENST00000578534 80 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 AL442128.1-201ENST00000615151 90 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms