Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 RNA5SP236-201ENST00000516169 116 ntBASIC-1.21□□□□□ -2.6
SSR2P43308 RNU6-277P-201ENST00000516272 106 ntBASIC-1.21□□□□□ -2.6
SSR2P43308 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
SSR2P43308 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.21□□□□□ -2.6
SSR2P43308 MIR6854-201ENST00000614935 69 ntBASIC-1.21□□□□□ -2.6
SSR2P43308 SNORD116-2-201ENST00000384274 95 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 SNORD2.1-201ENST00000458762 69 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 SCARNA17-201ENST00000516183 144 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 TRDV1-202ENST00000621643 102 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 MIR6086-201ENST00000638065 55 ntBASIC-1.22□□□□□ -2.6
SSR2P43308 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.23□□□□□ -2.61
SSR2P43308 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.23□□□□□ -2.61
SSR2P43308 SNORD77B-201ENST00000391112 67 ntBASIC-1.23□□□□□ -2.61
SSR2P43308 snoU13.19-201ENST00000459148 104 ntBASIC-1.23□□□□□ -2.61
SSR2P43308 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 SERF1AP1-201ENST00000514575 187 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 MIR4499-201ENST00000584834 69 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 AC080013.6-201ENST00000606185 215 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 MIR548O2-201ENST00000616090 70 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 U6.100-201ENST00000636230 99 ntBASIC-1.24□□□□□ -2.61
SSR2P43308 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 MIR147A-201ENST00000385079 72 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 MT-TL1-201ENST00000386347 75 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 MIR8068-201ENST00000618032 68 ntBASIC-1.25□□□□□ -2.61
SSR2P43308 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 RNU6-103P-201ENST00000363686 107 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 MIR216B-201ENST00000390186 82 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.26□□□□□ -2.61
SSR2P43308 AL121914.1-201ENST00000450188 156 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 RNU7-164P-201ENST00000459221 62 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 AC026407.1-201ENST00000518369 204 ntBASIC-1.26□□□□□ -2.61
SSR2P43308 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 MIR582-201ENST00000365731 98 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 RNU6-30P-201ENST00000384561 107 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 SNORD64-201ENST00000386683 67 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 AL161932.1-201ENST00000437408 146 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 RNU7-123P-201ENST00000515911 60 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.27□□□□□ -2.61
SSR2P43308 AC138907.4-201ENST00000570107 226 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 AC021443.1-201ENST00000604478 211 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 MIR6738-201ENST00000619620 64 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 AL365265.1-201ENST00000621045 234 ntBASIC-1.27□□□□□ -2.61
SSR2P43308 SNORD36A-201ENST00000362874 73 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6-623P-201ENST00000363143 105 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 SNORD27-201ENST00000363981 72 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6-616P-201ENST00000384353 107 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 MIR34C-201ENST00000384831 77 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 MIR1252-201ENST00000408861 65 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 FGF7P6-202ENST00000451282 293 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 SCARNA18B-201ENST00000458806 135 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6-274P-201ENST00000459566 107 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6-240P-201ENST00000516098 97 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.28□□□□□ -2.61
SSR2P43308 AC140658.3-201ENST00000567603 271 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 MIR4324-201ENST00000584846 72 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.28□□□□□ -2.61
SSR2P43308 RNU6-770P-201ENST00000363929 105 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 RNU4-17P-201ENST00000365598 141 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 RNU6-823P-201ENST00000391042 103 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 RNU6-243P-201ENST00000391140 107 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 RNU6-651P-201ENST00000411040 105 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 AC138393.2-201ENST00000414742 246 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 SNORD19B-201ENST00000459623 84 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 RNA5SP67-201ENST00000516422 131 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 AL442663.2-201ENST00000554385 511 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 MIR4744-201ENST00000581563 82 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 MIR382-201ENST00000637119 76 ntBASIC-1.29□□□□□ -2.62
SSR2P43308 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.3□□□□□ -2.62
SSR2P43308 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.3□□□□□ -2.62
SSR2P43308 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.3□□□□□ -2.62
SSR2P43308 RNU6-876P-201ENST00000391295 104 ntBASIC-1.3□□□□□ -2.62
SSR2P43308 ELOCP20-201ENST00000422460 345 ntBASIC-1.3□□□□□ -2.62
SSR2P43308 AL353813.1-201ENST00000440700 253 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms