Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MIR4432-201ENST00000581823 84 ntBASIC-0.71□□□□□ -2.52
MDH1P40925 uc_338.36-201ENST00000622331 158 ntBASIC-0.71□□□□□ -2.52
MDH1P40925 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.72□□□□□ -2.52
MDH1P40925 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.73□□□□□ -2.53
MDH1P40925 SNORD63B-201ENST00000411005 70 ntBASIC-0.73□□□□□ -2.53
MDH1P40925 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.73□□□□□ -2.53
MDH1P40925 RNU7-188P-201ENST00000517063 64 ntBASIC-0.73□□□□□ -2.53
MDH1P40925 MIR4473-201ENST00000583731 91 ntBASIC-0.73□□□□□ -2.53
MDH1P40925 RNU6-170P-201ENST00000362832 104 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 RNA5SP98-201ENST00000363158 137 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 RNU6-818P-201ENST00000364837 108 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
MDH1P40925 MIR548H3-201ENST00000408771 118 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 RNA5SP451-201ENST00000410588 110 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 RNU7-195P-201ENST00000458793 62 ntBASIC-0.74□□□□□ -2.53
MDH1P40925 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.75□□□□□ -2.53
MDH1P40925 RNU1-141P-201ENST00000364623 158 ntBASIC-0.75□□□□□ -2.53
MDH1P40925 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.75□□□□□ -2.53
MDH1P40925 MTND5P40-201ENST00000559945 246 ntBASIC-0.75□□□□□ -2.53
MDH1P40925 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 RNY4P28-201ENST00000365281 93 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 RNU6-524P-201ENST00000384270 107 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 MIR1270-201ENST00000459320 83 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 RNU7-123P-201ENST00000515911 60 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 RNU7-2P-201ENST00000516096 62 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 uc_338.10-201ENST00000621872 182 ntBASIC-0.76□□□□□ -2.53
MDH1P40925 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.77□□□□□ -2.53
MDH1P40925 AC044792.1-201ENST00000593294 196 ntBASIC-0.77□□□□□ -2.53
MDH1P40925 RNU6-571P-201ENST00000384128 107 ntBASIC-0.78□□□□□ -2.53
MDH1P40925 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.78□□□□□ -2.53
MDH1P40925 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.78□□□□□ -2.53
MDH1P40925 MIR4436A-201ENST00000585278 85 ntBASIC-0.78□□□□□ -2.53
MDH1P40925 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 SNORD115-44-201ENST00000365391 82 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 MIR604-201ENST00000384880 94 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 RPS29P8-201ENST00000445109 171 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 RNA5SP169-201ENST00000517268 117 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
MDH1P40925 AC069503.3-201ENST00000618674 145 ntBASIC-0.79□□□□□ -2.54
MDH1P40925 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 SNORD18B-201ENST00000365659 72 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 RNU6-768P-201ENST00000384683 107 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 MIR181B2-201ENST00000385004 89 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 MTATP8P1-201ENST00000467115 207 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 MIR4308-201ENST00000580634 81 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 U6.106-201ENST00000636360 105 ntBASIC-0.8□□□□□ -2.54
MDH1P40925 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 RNU6-472P-201ENST00000384299 107 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 SNORA75.5-201ENST00000391291 81 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 RNU6-175P-201ENST00000516896 107 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 RNA5SP66-201ENST00000517178 101 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 MIR548AE1-201ENST00000583292 70 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 AC009779.6-201ENST00000603972 165 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 AL391099.1-201ENST00000624635 187 ntBASIC-0.81□□□□□ -2.54
MDH1P40925 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 SNORD114-29-201ENST00000364819 70 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 RNU6-455P-201ENST00000384681 107 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 MIR617-201ENST00000385030 97 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 AC107027.2-201ENST00000512197 115 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 MIR548AG2-201ENST00000581228 64 ntBASIC-0.82□□□□□ -2.54
MDH1P40925 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 SNORD115-35-201ENST00000365122 82 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 RNU6-35P-201ENST00000384530 107 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 MTCYBP6-201ENST00000441810 138 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.83□□□□□ -2.54
MDH1P40925 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 YWHAEP2-201ENST00000580066 112 ntBASIC-0.83□□□□□ -2.54
MDH1P40925 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.84□□□□□ -2.54
MDH1P40925 AL603914.1-201ENST00000401964 204 ntBASIC-0.84□□□□□ -2.54
MDH1P40925 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.84□□□□□ -2.54
MDH1P40925 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.84□□□□□ -2.54
MDH1P40925 MIR376B-201ENST00000614515 100 ntBASIC-0.84□□□□□ -2.54
MDH1P40925 MIR6844-201ENST00000637122 62 ntBASIC-0.84□□□□□ -2.54
MDH1P40925 RNU4-84P-201ENST00000364200 139 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 MIR539-201ENST00000365690 78 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 MIR519E-201ENST00000385075 84 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 SNORD75.1-201ENST00000408373 60 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 RNU2-38P-201ENST00000410856 79 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 RNU6-758P-201ENST00000516292 89 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 MIR4460-201ENST00000577862 86 ntBASIC-0.85□□□□□ -2.55
MDH1P40925 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.86□□□□□ -2.55
MDH1P40925 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.86□□□□□ -2.55
MDH1P40925 RNU6-616P-201ENST00000384353 107 ntBASIC-0.86□□□□□ -2.55
MDH1P40925 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.86□□□□□ -2.55
MDH1P40925 SNORD38.2-201ENST00000384470 69 ntBASIC-0.86□□□□□ -2.55
MDH1P40925 MIR9-2-201ENST00000384838 87 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms