Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MIR518E-201ENST00000385252 88 ntBASIC1.74□□□□□ -2.13
GDNFP39905 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
GDNFP39905 RNU7-185P-201ENST00000459215 60 ntBASIC1.74□□□□□ -2.13
GDNFP39905 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.74□□□□□ -2.13
GDNFP39905 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
GDNFP39905 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
GDNFP39905 Y_RNA.13-201ENST00000362403 112 ntBASIC1.73□□□□□ -2.13
GDNFP39905 RNU6-208P-201ENST00000362431 107 ntBASIC1.73□□□□□ -2.13
GDNFP39905 RNU6-411P-201ENST00000384451 107 ntBASIC1.73□□□□□ -2.13
GDNFP39905 SNORA64-201ENST00000384674 134 ntBASIC1.73□□□□□ -2.13
GDNFP39905 MIR520H-201ENST00000385126 88 ntBASIC1.73□□□□□ -2.13
GDNFP39905 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
GDNFP39905 RN7SKP223-201ENST00000410582 62 ntBASIC1.73□□□□□ -2.13
GDNFP39905 SNORD83.1-201ENST00000411362 77 ntBASIC1.73□□□□□ -2.13
GDNFP39905 AL606490.4-201ENST00000423117 127 ntBASIC1.73□□□□□ -2.13
GDNFP39905 MIR1273D-201ENST00000577266 86 ntBASIC1.73□□□□□ -2.13
GDNFP39905 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
GDNFP39905 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
GDNFP39905 SNORD1A-201ENST00000364968 72 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU1-41P-201ENST00000516161 162 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU1-48P-201ENST00000516400 162 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU6-70P-201ENST00000516438 60 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU6-448P-201ENST00000517052 107 ntBASIC1.72□□□□□ -2.13
GDNFP39905 RNU6-1015P-201ENST00000517121 99 ntBASIC1.72□□□□□ -2.13
GDNFP39905 MIR4648-201ENST00000580107 72 ntBASIC1.72□□□□□ -2.13
GDNFP39905 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
GDNFP39905 Y_RNA.264-201ENST00000364665 102 ntBASIC1.71□□□□□ -2.14
GDNFP39905 MIR1257-201ENST00000408490 117 ntBASIC1.71□□□□□ -2.14
GDNFP39905 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
GDNFP39905 snoU13.17-201ENST00000458802 104 ntBASIC1.71□□□□□ -2.14
GDNFP39905 snoU13.9-201ENST00000458927 103 ntBASIC1.71□□□□□ -2.14
GDNFP39905 Y_RNA.809-201ENST00000516058 95 ntBASIC1.71□□□□□ -2.14
GDNFP39905 RNU6-807P-201ENST00000516805 107 ntBASIC1.71□□□□□ -2.14
GDNFP39905 MIR548H5-201ENST00000580314 60 ntBASIC1.71□□□□□ -2.14
GDNFP39905 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
GDNFP39905 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
GDNFP39905 MIR6082-201ENST00000613604 109 ntBASIC1.71□□□□□ -2.14
GDNFP39905 TRDV1-202ENST00000621643 102 ntBASIC1.71□□□□□ -2.14
GDNFP39905 MIR664A-201ENST00000626086 82 ntBASIC1.71□□□□□ -2.14
GDNFP39905 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
GDNFP39905 Y_RNA.330-201ENST00000365230 109 ntBASIC1.7□□□□□ -2.14
GDNFP39905 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
GDNFP39905 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.7□□□□□ -2.14
GDNFP39905 AC092628.1-201ENST00000436250 252 ntBASIC1.7□□□□□ -2.14
GDNFP39905 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
GDNFP39905 HMGN2P23-201ENST00000456759 269 ntBASIC1.7□□□□□ -2.14
GDNFP39905 AC079140.2-201ENST00000506193 142 ntBASIC1.7□□□□□ -2.14
GDNFP39905 RNU6-165P-201ENST00000517170 99 ntBASIC1.7□□□□□ -2.14
GDNFP39905 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
GDNFP39905 Y_RNA.12-201ENST00000362393 112 ntBASIC1.69□□□□□ -2.14
GDNFP39905 Y_RNA.56-201ENST00000362798 112 ntBASIC1.69□□□□□ -2.14
GDNFP39905 MIR1261-201ENST00000408659 82 ntBASIC1.69□□□□□ -2.14
GDNFP39905 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
GDNFP39905 MIR3664-201ENST00000579074 99 ntBASIC1.69□□□□□ -2.14
GDNFP39905 MIR3937-201ENST00000580135 106 ntBASIC1.69□□□□□ -2.14
GDNFP39905 MIR1297-201ENST00000637311 77 ntBASIC1.69□□□□□ -2.14
GDNFP39905 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
GDNFP39905 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
GDNFP39905 RNU6-934P-201ENST00000365154 107 ntBASIC1.68□□□□□ -2.14
GDNFP39905 RNU6-1051P-201ENST00000365471 102 ntBASIC1.68□□□□□ -2.14
GDNFP39905 Y_RNA.681-201ENST00000516445 113 ntBASIC1.68□□□□□ -2.14
GDNFP39905 Y_RNA.697-201ENST00000516776 113 ntBASIC1.68□□□□□ -2.14
GDNFP39905 RNU6-303P-201ENST00000517091 106 ntBASIC1.68□□□□□ -2.14
GDNFP39905 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.68□□□□□ -2.14
GDNFP39905 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
GDNFP39905 RNU7-10P-201ENST00000607194 63 ntBASIC1.68□□□□□ -2.14
GDNFP39905 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.68□□□□□ -2.14
GDNFP39905 ZNF209P-201ENST00000593450 2304 ntBASIC1.67□□□□□ -2.14
GDNFP39905 RNU6-590P-201ENST00000365039 107 ntBASIC1.67□□□□□ -2.14
GDNFP39905 MIR519A1-201ENST00000385257 85 ntBASIC1.67□□□□□ -2.14
GDNFP39905 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
GDNFP39905 AC104984.5-201ENST00000586878 94 ntBASIC1.67□□□□□ -2.14
GDNFP39905 RNU6-1260P-201ENST00000362944 107 ntBASIC1.66□□□□□ -2.14
GDNFP39905 Y_RNA.239-201ENST00000364444 113 ntBASIC1.66□□□□□ -2.14
GDNFP39905 RNU6-1065P-201ENST00000384513 106 ntBASIC1.66□□□□□ -2.14
GDNFP39905 AC074348.1-201ENST00000426503 132 ntBASIC1.66□□□□□ -2.14
GDNFP39905 AC048334.1-201ENST00000477975 159 ntBASIC1.66□□□□□ -2.14
GDNFP39905 RNU6-871P-201ENST00000516122 100 ntBASIC1.66□□□□□ -2.14
GDNFP39905 RNU6-687P-201ENST00000516443 89 ntBASIC1.66□□□□□ -2.14
GDNFP39905 RNU6-539P-201ENST00000516665 103 ntBASIC1.66□□□□□ -2.14
GDNFP39905 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
GDNFP39905 MIR4771-2-201ENST00000577758 74 ntBASIC1.66□□□□□ -2.14
GDNFP39905 YWHAEP2-201ENST00000580066 112 ntBASIC1.66□□□□□ -2.14
GDNFP39905 MIR4771-1-201ENST00000582617 74 ntBASIC1.66□□□□□ -2.14
GDNFP39905 YWHAEP3-201ENST00000582767 121 ntBASIC1.66□□□□□ -2.14
GDNFP39905 U6.100-201ENST00000636230 99 ntBASIC1.66□□□□□ -2.14
GDNFP39905 MIR219B-201ENST00000637023 88 ntBASIC1.66□□□□□ -2.14
GDNFP39905 RNU6-664P-201ENST00000362381 107 ntBASIC1.65□□□□□ -2.15
GDNFP39905 Y_RNA.207-201ENST00000364142 106 ntBASIC1.65□□□□□ -2.15
GDNFP39905 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
GDNFP39905 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
GDNFP39905 snoU13.15-201ENST00000459407 104 ntBASIC1.65□□□□□ -2.15
GDNFP39905 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
GDNFP39905 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
GDNFP39905 MIR4696-201ENST00000581431 70 ntBASIC1.65□□□□□ -2.15
GDNFP39905 MIR3140-201ENST00000583685 90 ntBASIC1.65□□□□□ -2.15
GDNFP39905 RNU5F-1-201ENST00000362507 117 ntBASIC1.64□□□□□ -2.15
GDNFP39905 Y_RNA.371-201ENST00000365591 113 ntBASIC1.64□□□□□ -2.15
GDNFP39905 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms