Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
RORAP35398 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.38□□□□□ -2.47
RORAP35398 RNU7-195P-201ENST00000458793 62 ntBASIC-0.38□□□□□ -2.47
RORAP35398 AC008737.2-201ENST00000599446 118 ntBASIC-0.38□□□□□ -2.47
RORAP35398 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.38□□□□□ -2.47
RORAP35398 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.39□□□□□ -2.47
RORAP35398 RNU6-46P-201ENST00000383860 107 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.39□□□□□ -2.47
RORAP35398 SNORA75.5-201ENST00000391291 81 ntBASIC-0.39□□□□□ -2.47
RORAP35398 MIR548I2-201ENST00000408348 149 ntBASIC-0.39□□□□□ -2.47
RORAP35398 SNORD63B-201ENST00000411005 70 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.39□□□□□ -2.47
RORAP35398 CR383656.4-201ENST00000546909 122 ntBASIC-0.39□□□□□ -2.47
RORAP35398 AC009779.6-201ENST00000603972 165 ntBASIC-0.39□□□□□ -2.47
RORAP35398 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.39□□□□□ -2.47
RORAP35398 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.4□□□□□ -2.47
RORAP35398 SNORD114-12-201ENST00000365400 75 ntBASIC-0.4□□□□□ -2.47
RORAP35398 RNU6-47P-201ENST00000383866 107 ntBASIC-0.4□□□□□ -2.47
RORAP35398 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.4□□□□□ -2.47
RORAP35398 RNU7-2P-201ENST00000516096 62 ntBASIC-0.4□□□□□ -2.47
RORAP35398 SNORA25.13-201ENST00000516395 103 ntBASIC-0.4□□□□□ -2.47
RORAP35398 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
RORAP35398 MIR4645-201ENST00000583158 77 ntBASIC-0.4□□□□□ -2.47
RORAP35398 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
RORAP35398 MIR376B-201ENST00000614515 100 ntBASIC-0.4□□□□□ -2.47
RORAP35398 AP001362.1-201ENST00000625165 124 ntBASIC-0.4□□□□□ -2.47
RORAP35398 RNU6-509P-201ENST00000363519 107 ntBASIC-0.41□□□□□ -2.48
RORAP35398 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.41□□□□□ -2.48
RORAP35398 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.41□□□□□ -2.48
RORAP35398 RNA5SP275-201ENST00000363936 118 ntBASIC-0.41□□□□□ -2.48
RORAP35398 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.41□□□□□ -2.48
RORAP35398 MIR568-201ENST00000385036 95 ntBASIC-0.41□□□□□ -2.48
RORAP35398 RNU6-588P-201ENST00000410281 105 ntBASIC-0.41□□□□□ -2.48
RORAP35398 MTATP6P21-201ENST00000440681 189 ntBASIC-0.41□□□□□ -2.48
RORAP35398 MIR148A-201ENST00000362215 68 ntBASIC-0.42□□□□□ -2.48
RORAP35398 RNU6-616P-201ENST00000384353 107 ntBASIC-0.42□□□□□ -2.48
RORAP35398 RNU6-738P-201ENST00000384531 106 ntBASIC-0.42□□□□□ -2.48
RORAP35398 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
RORAP35398 AC109327.2-201ENST00000448339 378 ntBASIC-0.42□□□□□ -2.48
RORAP35398 RNU7-106P-201ENST00000459514 67 ntBASIC-0.42□□□□□ -2.48
RORAP35398 AC107027.2-201ENST00000512197 115 ntBASIC-0.42□□□□□ -2.48
RORAP35398 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.42□□□□□ -2.48
RORAP35398 MTND5P40-201ENST00000559945 246 ntBASIC-0.42□□□□□ -2.48
RORAP35398 MIR548AG2-201ENST00000581228 64 ntBASIC-0.42□□□□□ -2.48
RORAP35398 MIR3128-201ENST00000581957 66 ntBASIC-0.42□□□□□ -2.48
RORAP35398 AC084368.1-201ENST00000620935 65 ntBASIC-0.42□□□□□ -2.48
RORAP35398 RNU6-170P-201ENST00000362832 104 ntBASIC-0.43□□□□□ -2.48
RORAP35398 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.43□□□□□ -2.48
RORAP35398 SNORD114-28-201ENST00000363610 72 ntBASIC-0.43□□□□□ -2.48
RORAP35398 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.43□□□□□ -2.48
RORAP35398 RNU6-309P-201ENST00000364573 106 ntBASIC-0.43□□□□□ -2.48
RORAP35398 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.43□□□□□ -2.48
RORAP35398 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.43□□□□□ -2.48
RORAP35398 RNU6-524P-201ENST00000384270 107 ntBASIC-0.43□□□□□ -2.48
RORAP35398 MIR516B1-201ENST00000385211 90 ntBASIC-0.43□□□□□ -2.48
RORAP35398 RNU4-71P-201ENST00000516258 113 ntBASIC-0.43□□□□□ -2.48
RORAP35398 AP001180.6-201ENST00000584918 159 ntBASIC-0.43□□□□□ -2.48
RORAP35398 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.44□□□□□ -2.48
RORAP35398 RNU1-141P-201ENST00000364623 158 ntBASIC-0.44□□□□□ -2.48
RORAP35398 SNORD115-35-201ENST00000365122 82 ntBASIC-0.44□□□□□ -2.48
RORAP35398 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.44□□□□□ -2.48
RORAP35398 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.44□□□□□ -2.48
RORAP35398 SNORD77B-201ENST00000391112 67 ntBASIC-0.44□□□□□ -2.48
RORAP35398 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.44□□□□□ -2.48
RORAP35398 RNU7-13P-201ENST00000516413 62 ntBASIC-0.44□□□□□ -2.48
RORAP35398 RNU6-111P-201ENST00000517179 105 ntBASIC-0.44□□□□□ -2.48
RORAP35398 AC108081.1-201ENST00000604358 221 ntBASIC-0.44□□□□□ -2.48
RORAP35398 RN7SL660P-201ENST00000614852 299 ntBASIC-0.44□□□□□ -2.48
RORAP35398 MIR6844-201ENST00000637122 62 ntBASIC-0.44□□□□□ -2.48
RORAP35398 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.45□□□□□ -2.48
RORAP35398 RNU6-312P-201ENST00000364629 107 ntBASIC-0.45□□□□□ -2.48
RORAP35398 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
RORAP35398 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.45□□□□□ -2.48
RORAP35398 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.45□□□□□ -2.48
RORAP35398 MTCYBP9-201ENST00000431021 303 ntBASIC-0.45□□□□□ -2.48
RORAP35398 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.45□□□□□ -2.48
RORAP35398 RNY4P20-201ENST00000516678 93 ntBASIC-0.45□□□□□ -2.48
RORAP35398 MIR4493-201ENST00000584016 73 ntBASIC-0.45□□□□□ -2.48
RORAP35398 MIR3658-201ENST00000636291 56 ntBASIC-0.45□□□□□ -2.48
RORAP35398 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.46□□□□□ -2.48
RORAP35398 AC093423.1-201ENST00000440817 142 ntBASIC-0.46□□□□□ -2.48
RORAP35398 RNA5SP476-201ENST00000516613 103 ntBASIC-0.46□□□□□ -2.48
RORAP35398 MIR3646-201ENST00000578301 84 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.46□□□□□ -2.48
RORAP35398 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.46□□□□□ -2.48
RORAP35398 MIR655-201ENST00000362159 97 ntBASIC-0.47□□□□□ -2.48
RORAP35398 SNORD49B-201ENST00000365172 72 ntBASIC-0.47□□□□□ -2.48
RORAP35398 RNU6-571P-201ENST00000384128 107 ntBASIC-0.47□□□□□ -2.48
RORAP35398 MIR34C-201ENST00000384831 77 ntBASIC-0.47□□□□□ -2.48
RORAP35398 MIR519E-201ENST00000385075 84 ntBASIC-0.47□□□□□ -2.48
RORAP35398 AC244250.2-201ENST00000418731 148 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms