Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 Y_RNA.36-201ENST00000362602 112 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 RNA5SP133-201ENST00000363368 119 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 MIR34C-201ENST00000384831 77 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SLC6A4P31645 Y_RNA.588-201ENST00000391254 102 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 MIR938-201ENST00000401216 83 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 Y_RNA.601-201ENST00000410500 113 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 RNU6-765P-201ENST00000516916 99 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 MIR4676-201ENST00000583078 72 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 MIR6779-201ENST00000617283 64 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 Y_RNA.818-201ENST00000618813 71 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
SLC6A4P31645 RNU6-153P-201ENST00000364422 104 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 RNU6-1307P-201ENST00000391012 103 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 RNU6-904P-201ENST00000516206 101 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 RNU6-977P-201ENST00000516411 103 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 PVT1_3.1-201ENST00000620853 95 ntBASIC1.15□□□□□ -2.23
SLC6A4P31645 HSBP1P2-201ENST00000299671 229 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 RNU6-403P-201ENST00000363163 104 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 Y_RNA.119-201ENST00000363301 96 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 SNORD45B-201ENST00000364617 72 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 RNU6-364P-201ENST00000384387 107 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 Y_RNA.544-201ENST00000384650 113 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 MIR4439-201ENST00000583746 80 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 SNORD92-201ENST00000585078 85 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 AC020891.4-201ENST00000605745 93 ntBASIC1.14□□□□□ -2.23
SLC6A4P31645 RNU6-32P-201ENST00000383948 107 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU6-13P-201ENST00000384248 107 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU6-12P-201ENST00000384604 107 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU6-41P-201ENST00000384741 107 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU6-1006P-201ENST00000516998 103 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU7-156P-201ENST00000517214 74 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
SLC6A4P31645 RNU6-369P-201ENST00000362515 102 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 Y_RNA.96-201ENST00000363092 109 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 RNU6-147P-201ENST00000383983 107 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 SCARNA23-201ENST00000516060 130 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
SLC6A4P31645 MIR450A1-201ENST00000362262 91 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 RNU1-119P-201ENST00000391122 165 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 AP003327.1-201ENST00000529684 127 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 MTND5P40-201ENST00000559945 246 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 RNU6-90P-201ENST00000606352 106 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 MIR8066-201ENST00000617280 78 ntBASIC1.11□□□□□ -2.23
SLC6A4P31645 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SLC6A4P31645 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 MIR548G-201ENST00000408442 89 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 Y_RNA.659-201ENST00000515994 113 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 SNORA25.16-201ENST00000516741 121 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 RNU6-158P-201ENST00000517104 100 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 MIR4500-201ENST00000579472 76 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 AC090897.1-201ENST00000580909 226 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 RNU7-10P-201ENST00000607194 63 ntBASIC1.1□□□□□ -2.23
SLC6A4P31645 Y_RNA.13-201ENST00000362403 112 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 Y_RNA.93-201ENST00000363066 109 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 AC015818.7-201ENST00000428754 109 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 AC087499.7-201ENST00000441958 109 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 RNU6-531P-201ENST00000516694 104 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC6A4P31645 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC6A4P31645 MIR2052-201ENST00000636055 55 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
SLC6A4P31645 MIR101-2-201ENST00000362195 79 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 RNA5SP325-201ENST00000363756 130 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SLC6A4P31645 MIR590-201ENST00000385008 97 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 SPINT5P-201ENST00000448174 155 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.08□□□□□ -2.24
SLC6A4P31645 RNU6-537P-201ENST00000517277 103 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 MIR3613-201ENST00000579844 87 ntBASIC1.08□□□□□ -2.24
SLC6A4P31645 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SLC6A4P31645 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SLC6A4P31645 Y_RNA.95-201ENST00000363079 95 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 Y_RNA.495-201ENST00000384435 112 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 SNRPGP12-201ENST00000449481 213 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 RNU7-102P-201ENST00000458948 62 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 MIR548H5-201ENST00000580314 60 ntBASIC1.07□□□□□ -2.24
SLC6A4P31645 Y_RNA.107-201ENST00000363190 121 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms