Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Y_RNA.272-201ENST00000364696 102 ntBASIC0.06□□□□□ -2.4
HOXA9P31269 Y_RNA.299-201ENST00000364973 94 ntBASIC0.06□□□□□ -2.4
HOXA9P31269 RNU7-197P-201ENST00000458836 62 ntBASIC0.06□□□□□ -2.4
HOXA9P31269 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 Y_RNA.401-201ENST00000383965 117 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 Y_RNA.448-201ENST00000384185 108 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 Y_RNA.552-201ENST00000384665 112 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 TRAJ51-201ENST00000504127 63 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 Y_RNA.662-201ENST00000516028 97 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 RNY4P20-201ENST00000516678 93 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 IGKV1-22-201ENST00000524313 326 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 AC138869.1-201ENST00000568623 124 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 MIR4500-201ENST00000579472 76 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 MIR3121-201ENST00000579680 77 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 AL137067.1-201ENST00000615933 120 ntBASIC0.05□□□□□ -2.4
HOXA9P31269 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 RNA5SP403-201ENST00000363598 108 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 RNU4-11P-201ENST00000365287 132 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 RNU6-616P-201ENST00000384353 107 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 MT-TI-201ENST00000387365 69 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 RNU7-48P-201ENST00000458875 63 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 SNORA81.3-201ENST00000517283 198 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 MIR548H5-201ENST00000580314 60 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 AC004792.1-201ENST00000614523 137 ntBASIC0.04□□□□□ -2.4
HOXA9P31269 Y_RNA.29-201ENST00000362570 113 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 Y_RNA.178-201ENST00000363832 102 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 MIR760-201ENST00000390220 80 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 RNU6-127P-201ENST00000390897 107 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 RNU6-460P-201ENST00000391158 108 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 RPL39P34-201ENST00000477141 156 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 RNU5E-3P-201ENST00000515913 68 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 RNU7-2P-201ENST00000516096 62 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
HOXA9P31269 Y_RNA.98-201ENST00000363109 102 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 Y_RNA.127-201ENST00000363386 109 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 RNU6-151P-201ENST00000364158 107 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 Y_RNA.328-201ENST00000365208 113 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 RNU6-1130P-201ENST00000365434 107 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 RNU6-449P-201ENST00000383914 107 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 MIR635-201ENST00000384830 98 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 BX276092.1-201ENST00000427368 251 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 AC087741.2-201ENST00000619415 172 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 AL162376.1-201ENST00000624117 175 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 MIR499B-201ENST00000636498 73 ntBASIC0.02□□□□□ -2.41
HOXA9P31269 Y_RNA.221-201ENST00000364248 96 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 SNORD115-35-201ENST00000365122 82 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.362-201ENST00000365518 110 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.785-201ENST00000384290 109 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 SNORD77B-201ENST00000391112 67 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 AL078595.1-201ENST00000404458 226 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 RNU6-394P-201ENST00000410735 107 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.700-201ENST00000516806 100 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 SNORA70.25-201ENST00000612741 95 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 MIR376B-201ENST00000614515 100 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.778-201ENST00000620203 90 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 AP001362.1-201ENST00000625165 124 ntBASIC0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.257-201ENST00000364596 102 ntBASIC0□□□□□ -2.41
HOXA9P31269 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
HOXA9P31269 SNORD41.1-201ENST00000391000 69 ntBASIC0□□□□□ -2.41
HOXA9P31269 Y_RNA.580-201ENST00000391004 95 ntBASIC0□□□□□ -2.41
HOXA9P31269 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
HOXA9P31269 RNU7-104P-201ENST00000459398 79 ntBASIC0□□□□□ -2.41
HOXA9P31269 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
HOXA9P31269 RNU6-915P-201ENST00000364943 103 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 MIR599-201ENST00000385069 95 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 RNU6-269P-201ENST00000391077 97 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 RNA5SP395-201ENST00000516567 118 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 RNU7-10P-201ENST00000607194 63 ntBASIC-0.01□□□□□ -2.41
HOXA9P31269 MIR548L-201ENST00000408303 86 ntBASIC-0.02□□□□□ -2.41
HOXA9P31269 MIR548I2-201ENST00000408348 149 ntBASIC-0.02□□□□□ -2.41
HOXA9P31269 RNU7-6P-201ENST00000516845 62 ntBASIC-0.02□□□□□ -2.41
HOXA9P31269 MIR6759-201ENST00000638110 65 ntBASIC-0.02□□□□□ -2.41
HOXA9P31269 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 RNU6-865P-201ENST00000364772 107 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 MIR34C-201ENST00000384831 77 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 MIR501-201ENST00000390204 84 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 SNORD63B-201ENST00000411005 70 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 AC097635.1-201ENST00000450678 155 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 RNU7-195P-201ENST00000458793 62 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 RNU7-106P-201ENST00000459514 67 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 AC021753.1-201ENST00000635724 168 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
HOXA9P31269 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
HOXA9P31269 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms