Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU7-48P-201ENST00000458875 63 ntBASIC0.25□□□□□ -2.37
RPA1P27694 RNU7-2P-201ENST00000516096 62 ntBASIC0.25□□□□□ -2.37
RPA1P27694 AP001328.1-201ENST00000528550 176 ntBASIC0.25□□□□□ -2.37
RPA1P27694 MIR3671-201ENST00000580455 88 ntBASIC0.25□□□□□ -2.37
RPA1P27694 TUG1_4.1-201ENST00000619464 181 ntBASIC0.25□□□□□ -2.37
RPA1P27694 AP001340.1-201ENST00000624405 217 ntBASIC0.25□□□□□ -2.37
RPA1P27694 RNU4-58P-201ENST00000363192 141 ntBASIC0.24□□□□□ -2.37
RPA1P27694 Y_RNA.180-201ENST00000363867 113 ntBASIC0.24□□□□□ -2.37
RPA1P27694 Y_RNA.247-201ENST00000364500 92 ntBASIC0.24□□□□□ -2.37
RPA1P27694 RNU6-716P-201ENST00000365621 103 ntBASIC0.24□□□□□ -2.37
RPA1P27694 Y_RNA.555-201ENST00000384673 110 ntBASIC0.24□□□□□ -2.37
RPA1P27694 RNU6-257P-201ENST00000410238 98 ntBASIC0.24□□□□□ -2.37
RPA1P27694 AL158147.1-201ENST00000443970 75 ntBASIC0.24□□□□□ -2.37
RPA1P27694 Y_RNA.692-201ENST00000516627 105 ntBASIC0.24□□□□□ -2.37
RPA1P27694 MIR7111-201ENST00000619751 72 ntBASIC0.24□□□□□ -2.37
RPA1P27694 Y_RNA.127-201ENST00000363386 109 ntBASIC0.23□□□□□ -2.37
RPA1P27694 SNORD115-35-201ENST00000365122 82 ntBASIC0.23□□□□□ -2.37
RPA1P27694 Y_RNA.328-201ENST00000365208 113 ntBASIC0.23□□□□□ -2.37
RPA1P27694 RNU7-106P-201ENST00000459514 67 ntBASIC0.23□□□□□ -2.37
RPA1P27694 RNU6-521P-201ENST00000516663 105 ntBASIC0.23□□□□□ -2.37
RPA1P27694 SCARNA16.5-201ENST00000517114 183 ntBASIC0.23□□□□□ -2.37
RPA1P27694 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
RPA1P27694 RN7SL793P-201ENST00000583259 296 ntBASIC0.23□□□□□ -2.37
RPA1P27694 AC098479.1-201ENST00000609225 154 ntBASIC0.23□□□□□ -2.37
RPA1P27694 AC010487.4-201ENST00000637027 61 ntBASIC0.23□□□□□ -2.37
RPA1P27694 SNORD115-24-201ENST00000363528 82 ntBASIC0.22□□□□□ -2.37
RPA1P27694 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
RPA1P27694 Y_RNA.344-201ENST00000365381 112 ntBASIC0.22□□□□□ -2.37
RPA1P27694 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
RPA1P27694 RNU6-429P-201ENST00000384582 108 ntBASIC0.22□□□□□ -2.37
RPA1P27694 MIRLET7F2-201ENST00000385277 83 ntBASIC0.22□□□□□ -2.37
RPA1P27694 AC244505.6-201ENST00000452829 130 ntBASIC0.22□□□□□ -2.37
RPA1P27694 RNU6-1212P-201ENST00000517023 104 ntBASIC0.22□□□□□ -2.37
RPA1P27694 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.22□□□□□ -2.37
RPA1P27694 MIR101-2-201ENST00000362195 79 ntBASIC0.21□□□□□ -2.38
RPA1P27694 Y_RNA.56-201ENST00000362798 112 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNU6-774P-201ENST00000363238 107 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNU6-1099P-201ENST00000363533 107 ntBASIC0.21□□□□□ -2.38
RPA1P27694 Y_RNA.221-201ENST00000364248 96 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNU6-726P-201ENST00000364680 107 ntBASIC0.21□□□□□ -2.38
RPA1P27694 Y_RNA.488-201ENST00000384403 102 ntBASIC0.21□□□□□ -2.38
RPA1P27694 Y_RNA.528-201ENST00000384575 108 ntBASIC0.21□□□□□ -2.38
RPA1P27694 MIR548I1-201ENST00000408810 149 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNU7-107P-201ENST00000459121 61 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNA5SP227-201ENST00000516184 113 ntBASIC0.21□□□□□ -2.38
RPA1P27694 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
RPA1P27694 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.21□□□□□ -2.38
RPA1P27694 MIR4639-201ENST00000584938 69 ntBASIC0.21□□□□□ -2.38
RPA1P27694 SNORD115-19-201ENST00000363098 82 ntBASIC0.2□□□□□ -2.38
RPA1P27694 SNORD115-18-201ENST00000363293 82 ntBASIC0.2□□□□□ -2.38
RPA1P27694 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
RPA1P27694 SNORD115-17-201ENST00000364612 82 ntBASIC0.2□□□□□ -2.38
RPA1P27694 Y_RNA.299-201ENST00000364973 94 ntBASIC0.2□□□□□ -2.38
RPA1P27694 SNORD58C-201ENST00000365223 64 ntBASIC0.2□□□□□ -2.38
RPA1P27694 SNORA2A-201ENST00000383885 135 ntBASIC0.2□□□□□ -2.38
RPA1P27694 Y_RNA.568-201ENST00000384742 113 ntBASIC0.2□□□□□ -2.38
RPA1P27694 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.2□□□□□ -2.38
RPA1P27694 RNU7-195P-201ENST00000458793 62 ntBASIC0.2□□□□□ -2.38
RPA1P27694 SNORA70.25-201ENST00000612741 95 ntBASIC0.2□□□□□ -2.38
RPA1P27694 MIR924-201ENST00000638017 53 ntBASIC0.2□□□□□ -2.38
RPA1P27694 RNA5SP403-201ENST00000363598 108 ntBASIC0.19□□□□□ -2.38
RPA1P27694 Y_RNA.198-201ENST00000364013 98 ntBASIC0.19□□□□□ -2.38
RPA1P27694 Y_RNA.464-201ENST00000384282 110 ntBASIC0.19□□□□□ -2.38
RPA1P27694 MIR613-201ENST00000385248 95 ntBASIC0.19□□□□□ -2.38
RPA1P27694 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
RPA1P27694 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
RPA1P27694 RNU6-971P-201ENST00000516920 106 ntBASIC0.19□□□□□ -2.38
RPA1P27694 RNU6-1006P-201ENST00000516998 103 ntBASIC0.19□□□□□ -2.38
RPA1P27694 U7.2-201ENST00000607576 63 ntBASIC0.19□□□□□ -2.38
RPA1P27694 Y_RNA.98-201ENST00000363109 102 ntBASIC0.18□□□□□ -2.38
RPA1P27694 Y_RNA.360-201ENST00000365512 102 ntBASIC0.18□□□□□ -2.38
RPA1P27694 SNORD77B-201ENST00000391112 67 ntBASIC0.18□□□□□ -2.38
RPA1P27694 RNU2-59P-201ENST00000410482 191 ntBASIC0.18□□□□□ -2.38
RPA1P27694 SNORA7.5-201ENST00000410672 110 ntBASIC0.18□□□□□ -2.38
RPA1P27694 SNORD63B-201ENST00000411005 70 ntBASIC0.18□□□□□ -2.38
RPA1P27694 RNU7-104P-201ENST00000459398 79 ntBASIC0.18□□□□□ -2.38
RPA1P27694 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
RPA1P27694 AP001362.1-201ENST00000625165 124 ntBASIC0.18□□□□□ -2.38
RPA1P27694 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.18□□□□□ -2.38
RPA1P27694 Y_RNA.36-201ENST00000362602 112 ntBASIC0.17□□□□□ -2.38
RPA1P27694 Y_RNA.218-201ENST00000364218 104 ntBASIC0.17□□□□□ -2.38
RPA1P27694 RNU6-647P-201ENST00000364243 107 ntBASIC0.17□□□□□ -2.38
RPA1P27694 RNU6-1126P-201ENST00000384002 107 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MIR516A2-201ENST00000384888 90 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MIR516A1-201ENST00000385033 90 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MIR599-201ENST00000385069 95 ntBASIC0.17□□□□□ -2.38
RPA1P27694 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
RPA1P27694 RNU6-1061P-201ENST00000516530 99 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
RPA1P27694 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
RPA1P27694 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MIR499B-201ENST00000636498 73 ntBASIC0.17□□□□□ -2.38
RPA1P27694 AC091304.10-201ENST00000641554 121 ntBASIC0.17□□□□□ -2.38
RPA1P27694 MTND5P18-201ENST00000445624 1801 ntBASIC0.16□□□□□ -2.38
RPA1P27694 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
RPA1P27694 RNU6-865P-201ENST00000364772 107 ntBASIC0.16□□□□□ -2.38
RPA1P27694 MIR548D2-201ENST00000384955 97 ntBASIC0.16□□□□□ -2.38
RPA1P27694 RNU6-269P-201ENST00000391077 97 ntBASIC0.16□□□□□ -2.38
RPA1P27694 Y_RNA.586-201ENST00000391146 98 ntBASIC0.16□□□□□ -2.38
RPA1P27694 MIR548H2-201ENST00000408874 88 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms