Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC015688.6-201ENST00000577737 104 ntBASIC2.39□□□□□ -2.03
VARSP26640 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.39□□□□□ -2.03
VARSP26640 AC023934.1-201ENST00000574529 2389 ntBASIC2.39□□□□□ -2.03
VARSP26640 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VARSP26640 RNU6-1260P-201ENST00000362944 107 ntBASIC2.38□□□□□ -2.03
VARSP26640 RNU6-580P-201ENST00000365159 107 ntBASIC2.38□□□□□ -2.03
VARSP26640 SNORD101-201ENST00000384027 73 ntBASIC2.38□□□□□ -2.03
VARSP26640 MIR519A1-201ENST00000385257 85 ntBASIC2.38□□□□□ -2.03
VARSP26640 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VARSP26640 SNORA3.2-201ENST00000408221 125 ntBASIC2.38□□□□□ -2.03
VARSP26640 AC244636.1-201ENST00000421152 228 ntBASIC2.38□□□□□ -2.03
VARSP26640 AC092628.1-201ENST00000436250 252 ntBASIC2.38□□□□□ -2.03
VARSP26640 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
VARSP26640 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.38□□□□□ -2.03
VARSP26640 MIR4648-201ENST00000580107 72 ntBASIC2.38□□□□□ -2.03
VARSP26640 MIR4696-201ENST00000581431 70 ntBASIC2.38□□□□□ -2.03
VARSP26640 MIR4769-201ENST00000584126 77 ntBASIC2.38□□□□□ -2.03
VARSP26640 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.38□□□□□ -2.03
VARSP26640 U6.100-201ENST00000636230 99 ntBASIC2.38□□□□□ -2.03
VARSP26640 Y_RNA.13-201ENST00000362403 112 ntBASIC2.37□□□□□ -2.03
VARSP26640 Y_RNA.56-201ENST00000362798 112 ntBASIC2.37□□□□□ -2.03
VARSP26640 RNU6-471P-201ENST00000383944 106 ntBASIC2.37□□□□□ -2.03
VARSP26640 snoU13.23-201ENST00000458863 104 ntBASIC2.37□□□□□ -2.03
VARSP26640 RNU7-185P-201ENST00000459215 60 ntBASIC2.37□□□□□ -2.03
VARSP26640 SNORA77B-201ENST00000578179 125 ntBASIC2.37□□□□□ -2.03
VARSP26640 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.37□□□□□ -2.03
VARSP26640 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.37□□□□□ -2.03
VARSP26640 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VARSP26640 RNU6-681P-201ENST00000364012 104 ntBASIC2.36□□□□□ -2.03
VARSP26640 RNU6-1054P-201ENST00000411293 104 ntBASIC2.36□□□□□ -2.03
VARSP26640 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
VARSP26640 Y_RNA.697-201ENST00000516776 113 ntBASIC2.36□□□□□ -2.03
VARSP26640 SNRPGP19-201ENST00000603826 189 ntBASIC2.36□□□□□ -2.03
VARSP26640 snoU13.21-201ENST00000459368 105 ntBASIC2.35□□□□□ -2.03
VARSP26640 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.35□□□□□ -2.03
VARSP26640 MIR4299-201ENST00000577899 72 ntBASIC2.35□□□□□ -2.03
VARSP26640 MIR5089-201ENST00000580047 84 ntBASIC2.35□□□□□ -2.03
VARSP26640 MIR3675-201ENST00000583661 73 ntBASIC2.35□□□□□ -2.03
VARSP26640 AL627230.6-201ENST00000611129 280 ntBASIC2.35□□□□□ -2.03
VARSP26640 MIR6082-201ENST00000613604 109 ntBASIC2.35□□□□□ -2.03
VARSP26640 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
VARSP26640 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VARSP26640 MIR1257-201ENST00000408490 117 ntBASIC2.34□□□□□ -2.03
VARSP26640 AL356379.1-201ENST00000414105 126 ntBASIC2.34□□□□□ -2.03
VARSP26640 AC005520.4-201ENST00000604337 90 ntBASIC2.34□□□□□ -2.03
VARSP26640 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VARSP26640 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VARSP26640 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
VARSP26640 RNU6-895P-201ENST00000384125 103 ntBASIC2.33□□□□□ -2.04
VARSP26640 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
VARSP26640 RNU6-1052P-201ENST00000411398 104 ntBASIC2.33□□□□□ -2.04
VARSP26640 AC093423.1-201ENST00000440817 142 ntBASIC2.33□□□□□ -2.04
VARSP26640 RNU6-719P-201ENST00000516671 104 ntBASIC2.33□□□□□ -2.04
VARSP26640 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VARSP26640 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VARSP26640 MIR337-201ENST00000362281 93 ntBASIC2.32□□□□□ -2.04
VARSP26640 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
VARSP26640 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
VARSP26640 Y_RNA.606-201ENST00000410579 103 ntBASIC2.32□□□□□ -2.04
VARSP26640 SNORD83.1-201ENST00000411362 77 ntBASIC2.32□□□□□ -2.04
VARSP26640 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
VARSP26640 MIR8063-201ENST00000621930 81 ntBASIC2.32□□□□□ -2.04
VARSP26640 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
VARSP26640 SNORD45A-201ENST00000384512 84 ntBASIC2.31□□□□□ -2.04
VARSP26640 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VARSP26640 RNU6-630P-201ENST00000391258 106 ntBASIC2.31□□□□□ -2.04
VARSP26640 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
VARSP26640 AC097510.1-201ENST00000510945 133 ntBASIC2.31□□□□□ -2.04
VARSP26640 MIR4713-201ENST00000582691 75 ntBASIC2.31□□□□□ -2.04
VARSP26640 MIR4448-201ENST00000584360 86 ntBASIC2.31□□□□□ -2.04
VARSP26640 MIR8074-201ENST00000615081 81 ntBASIC2.31□□□□□ -2.04
VARSP26640 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.31□□□□□ -2.04
VARSP26640 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.3□□□□□ -2.04
VARSP26640 AC097635.1-201ENST00000450678 155 ntBASIC2.3□□□□□ -2.04
VARSP26640 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VARSP26640 SNORD45.1-201ENST00000363181 77 ntBASIC2.29□□□□□ -2.04
VARSP26640 MIR599-201ENST00000385069 95 ntBASIC2.29□□□□□ -2.04
VARSP26640 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VARSP26640 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
VARSP26640 MIR2113-201ENST00000459007 91 ntBASIC2.29□□□□□ -2.04
VARSP26640 AC108210.2-201ENST00000503681 201 ntBASIC2.29□□□□□ -2.04
VARSP26640 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
VARSP26640 MTRNR2L2-201ENST00000604882 87 ntBASIC2.29□□□□□ -2.04
VARSP26640 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
VARSP26640 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
VARSP26640 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.28□□□□□ -2.04
VARSP26640 RNU6-824P-201ENST00000363724 104 ntBASIC2.28□□□□□ -2.04
VARSP26640 MIR9-2-201ENST00000384838 87 ntBASIC2.28□□□□□ -2.04
VARSP26640 RNU6-935P-201ENST00000410371 100 ntBASIC2.28□□□□□ -2.04
VARSP26640 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VARSP26640 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
VARSP26640 SNORA67.3-201ENST00000384366 140 ntBASIC2.27□□□□□ -2.05
VARSP26640 MIR451A-201ENST00000385059 72 ntBASIC2.27□□□□□ -2.05
VARSP26640 MTND4LP19-201ENST00000403051 166 ntBASIC2.27□□□□□ -2.05
VARSP26640 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
VARSP26640 RNU6-765P-201ENST00000516916 99 ntBASIC2.27□□□□□ -2.05
VARSP26640 AC015712.3-201ENST00000559380 164 ntBASIC2.27□□□□□ -2.05
VARSP26640 AC138907.6-201ENST00000568401 126 ntBASIC2.27□□□□□ -2.05
VARSP26640 AC138869.1-201ENST00000568623 124 ntBASIC2.27□□□□□ -2.05
VARSP26640 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms