Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-774P-201ENST00000363238 107 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 SNORD38.2-201ENST00000384470 69 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 MIR548I2-201ENST00000408348 149 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
TNFSF4P23510 SNORA63.5-201ENST00000363548 123 ntBASIC0.53□□□□□ -2.32
TNFSF4P23510 SNORD28-201ENST00000384706 75 ntBASIC0.53□□□□□ -2.32
TNFSF4P23510 MIR1255B1-201ENST00000636325 63 ntBASIC0.53□□□□□ -2.32
TNFSF4P23510 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.53□□□□□ -2.32
TNFSF4P23510 SNORA36.1-201ENST00000363424 132 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 RNU4-67P-201ENST00000364569 141 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 Y_RNA.360-201ENST00000365512 102 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 MIR635-201ENST00000384830 98 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 AC244505.6-201ENST00000452829 130 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 RNA5SP47-201ENST00000517230 109 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 MIR4714-201ENST00000580728 77 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 MIR6828-201ENST00000636181 60 ntBASIC0.52□□□□□ -2.33
TNFSF4P23510 SNORD118-201ENST00000363593 134 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 Y_RNA.507-201ENST00000384500 99 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 MIR34C-201ENST00000384831 77 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 MIR548M-201ENST00000408260 86 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 RNA5SP268-201ENST00000516828 124 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 AC091304.10-201ENST00000641554 121 ntBASIC0.51□□□□□ -2.33
TNFSF4P23510 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 RNU6-363P-201ENST00000362895 105 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 RNU6-1099P-201ENST00000363533 107 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
TNFSF4P23510 RNU7-107P-201ENST00000459121 61 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 Y_RNA.712-201ENST00000517011 92 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 AC244669.1-204ENST00000621564 178 ntBASIC0.5□□□□□ -2.33
TNFSF4P23510 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
TNFSF4P23510 Y_RNA.344-201ENST00000365381 112 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 RNU6-571P-201ENST00000384128 107 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 Y_RNA.630-201ENST00000411370 108 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 BX276092.1-201ENST00000427368 251 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
TNFSF4P23510 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 RNU6-187P-201ENST00000384139 106 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 SNORA7.5-201ENST00000410672 110 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 SUMO1P3-201ENST00000439961 304 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 snoU13.18-201ENST00000459483 104 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 RNA5SP227-201ENST00000516184 113 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 U6.95-201ENST00000636931 70 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 MIR3914-2-201ENST00000637339 95 ntBASIC0.48□□□□□ -2.33
TNFSF4P23510 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
TNFSF4P23510 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TNFSF4P23510 Y_RNA.71-201ENST00000362892 104 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 SNORD115-24-201ENST00000363528 82 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 RNU6-409P-201ENST00000384114 104 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 AC097635.1-201ENST00000450678 155 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 RNU6-1018P-201ENST00000516577 106 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 AL512310.12-203ENST00000640543 90 ntBASIC0.47□□□□□ -2.33
TNFSF4P23510 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 RNU6-1313P-201ENST00000362622 102 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 Y_RNA.49-201ENST00000362714 112 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 RNU6-170P-201ENST00000362832 104 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 Y_RNA.155-201ENST00000363632 101 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 Y_RNA.218-201ENST00000364218 104 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 Y_RNA.362-201ENST00000365518 110 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 MIR519A1-201ENST00000385257 85 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 MIR1912-201ENST00000410389 80 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 SNRPGP12-201ENST00000449481 213 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 RPL39P34-201ENST00000477141 156 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 RNU6-659P-201ENST00000516454 104 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 AL162726.3-218ENST00000636401 95 ntBASIC0.46□□□□□ -2.34
TNFSF4P23510 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 SNORD116-14-201ENST00000383894 92 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 SNORD116-17-201ENST00000383929 92 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 SNORD116-15-201ENST00000384445 92 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 SNORD116-19-201ENST00000384729 92 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 TRAJ51-201ENST00000504127 63 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 MIR4679-2-201ENST00000578358 77 ntBASIC0.45□□□□□ -2.34
TNFSF4P23510 MIR599-201ENST00000385069 95 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 RNU6-816P-201ENST00000390914 107 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 RNU6-1268P-201ENST00000391214 107 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 RNU6-1239P-201ENST00000391310 107 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 RNU2-59P-201ENST00000410482 191 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 TMSB4XP3-201ENST00000445144 114 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 Y_RNA.649-201ENST00000459077 103 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 MTND5P40-201ENST00000559945 246 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 MIR7107-201ENST00000611489 80 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
TNFSF4P23510 SNORD44.1-201ENST00000363202 61 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 SNORD63B-201ENST00000411005 70 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 AC022709.1-201ENST00000615967 87 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
TNFSF4P23510 SNORD38.1-201ENST00000363863 68 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms