Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 RNU7-106P-201ENST00000459514 67 ntBASIC2.17□□□□□ -2.06
ATP4AP20648 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
ATP4AP20648 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.17□□□□□ -2.06
ATP4AP20648 MIR3134-201ENST00000579433 74 ntBASIC2.17□□□□□ -2.06
ATP4AP20648 MIR548H5-201ENST00000580314 60 ntBASIC2.17□□□□□ -2.06
ATP4AP20648 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
ATP4AP20648 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.16□□□□□ -2.06
ATP4AP20648 RNU6-957P-201ENST00000363652 99 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 MIR635-201ENST00000384830 98 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATP4AP20648 SNORD100-201ENST00000408573 76 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 RNA5SP95-201ENST00000410319 137 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 RNU6-523P-201ENST00000516304 54 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
ATP4AP20648 MIRLET7F1-201ENST00000362202 87 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 MIR518E-201ENST00000385252 88 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 MIR519A1-201ENST00000385257 85 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 MIR1257-201ENST00000408490 117 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 Y_RNA.681-201ENST00000516445 113 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
ATP4AP20648 Y_RNA.536-201ENST00000384621 113 ntBASIC2.14□□□□□ -2.07
ATP4AP20648 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
ATP4AP20648 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
ATP4AP20648 RNU6-539P-201ENST00000516665 103 ntBASIC2.14□□□□□ -2.07
ATP4AP20648 MIR4769-201ENST00000584126 77 ntBASIC2.14□□□□□ -2.07
ATP4AP20648 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.14□□□□□ -2.07
ATP4AP20648 RNU5F-1-201ENST00000362507 117 ntBASIC2.13□□□□□ -2.07
ATP4AP20648 RNU6-303P-201ENST00000517091 106 ntBASIC2.13□□□□□ -2.07
ATP4AP20648 MIR4484-201ENST00000582855 83 ntBASIC2.13□□□□□ -2.07
ATP4AP20648 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.13□□□□□ -2.07
ATP4AP20648 AC023934.1-201ENST00000574529 2389 ntBASIC2.13□□□□□ -2.07
ATP4AP20648 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATP4AP20648 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 RNU6-1065P-201ENST00000384513 106 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 Y_RNA.532-201ENST00000384590 113 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 MIR520H-201ENST00000385126 88 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ATP4AP20648 snoU13.9-201ENST00000458927 103 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 RNU7-185P-201ENST00000459215 60 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 RNU6-448P-201ENST00000517052 107 ntBASIC2.12□□□□□ -2.07
ATP4AP20648 Y_RNA.56-201ENST00000362798 112 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 RNU7-195P-201ENST00000458793 62 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 RPL23AP42-201ENST00000471152 471 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 TRAJ51-201ENST00000504127 63 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 RNU6-237P-201ENST00000515985 71 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 Y_RNA.809-201ENST00000516058 95 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 RNU6-70P-201ENST00000516438 60 ntBASIC2.11□□□□□ -2.07
ATP4AP20648 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ATP4AP20648 RNU6-1260P-201ENST00000362944 107 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 MIR583-201ENST00000384846 75 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ATP4AP20648 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 RNU6-765P-201ENST00000516916 99 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 SNORA44.1-201ENST00000517031 108 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 RNU6-1015P-201ENST00000517121 99 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 AC013244.2-201ENST00000603396 103 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 MIR6082-201ENST00000613604 109 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 TRDV1-202ENST00000621643 102 ntBASIC2.1□□□□□ -2.07
ATP4AP20648 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
ATP4AP20648 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATP4AP20648 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
ATP4AP20648 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
ATP4AP20648 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 Y_RNA.239-201ENST00000364444 113 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 AC108210.2-201ENST00000503681 201 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 AC079140.2-201ENST00000506193 142 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 AC019176.1-201ENST00000518519 225 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
ATP4AP20648 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
ATP4AP20648 MIR302D-201ENST00000362275 68 ntBASIC2.08□□□□□ -2.08
ATP4AP20648 RNY4P3-201ENST00000365254 95 ntBASIC2.08□□□□□ -2.08
ATP4AP20648 RPS27P16-201ENST00000425758 201 ntBASIC2.08□□□□□ -2.08
ATP4AP20648 AC097635.1-201ENST00000450678 155 ntBASIC2.08□□□□□ -2.08
ATP4AP20648 MIR3664-201ENST00000579074 99 ntBASIC2.08□□□□□ -2.08
ATP4AP20648 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.08□□□□□ -2.08
ATP4AP20648 Y_RNA.12-201ENST00000362393 112 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 Y_RNA.13-201ENST00000362403 112 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 AC092628.1-201ENST00000436250 252 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
ATP4AP20648 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.07□□□□□ -2.08
ATP4AP20648 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
ATP4AP20648 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.06□□□□□ -2.08
ATP4AP20648 AC074348.1-201ENST00000426503 132 ntBASIC2.06□□□□□ -2.08
ATP4AP20648 YWHAEP2-201ENST00000580066 112 ntBASIC2.06□□□□□ -2.08
ATP4AP20648 YWHAEP3-201ENST00000582767 121 ntBASIC2.06□□□□□ -2.08
ATP4AP20648 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
ATP4AP20648 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
ATP4AP20648 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms