Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU7-13P-201ENST00000516413 62 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 MIR3920-201ENST00000581751 86 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 MIR8064-201ENST00000612863 90 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 SNORD27-201ENST00000363981 72 ntBASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 SNORD127-201ENST00000458892 86 ntBASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.63□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 RNU6-35P-201ENST00000384530 107 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 MIR519A1-201ENST00000385257 85 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 MTND2P23-201ENST00000422990 651 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 RNU7-195P-201ENST00000458793 62 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 MIR4788-201ENST00000639104 80 ntBASIC-0.64□□□□□ -2.51
HLA-DPA1P20036 MIR101-1-201ENST00000362265 75 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 MIR548F4-201ENST00000408515 105 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 SNORD63B-201ENST00000411005 70 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 AC109327.2-201ENST00000448339 378 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.65□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 MIR196A2-201ENST00000385189 110 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 RNU7-2P-201ENST00000516096 62 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 AC009779.6-201ENST00000603972 165 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 AL162726.3-218ENST00000636401 95 ntBASIC-0.66□□□□□ -2.52
HLA-DPA1P20036 RNU6-170P-201ENST00000362832 104 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 RNA5SP98-201ENST00000363158 137 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 SNORA32.3-201ENST00000384772 121 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 SNORA75.5-201ENST00000391291 81 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 AC244250.2-201ENST00000418731 148 ntBASIC-0.67□□□□□ -2.52
HLA-DPA1P20036 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
HLA-DPA1P20036 MIR655-201ENST00000362159 97 ntBASIC-0.68□□□□□ -2.52
HLA-DPA1P20036 RNU6-811P-201ENST00000384069 107 ntBASIC-0.68□□□□□ -2.52
HLA-DPA1P20036 RNU6-524P-201ENST00000384270 107 ntBASIC-0.68□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.68□□□□□ -2.52
HLA-DPA1P20036 SNORD114-11-201ENST00000363738 75 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 RNU1-141P-201ENST00000364623 158 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 AC107027.2-201ENST00000512197 115 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 MTND5P40-201ENST00000559945 246 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 MIR3149-201ENST00000584629 83 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 MIR6844-201ENST00000637122 62 ntBASIC-0.69□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 SNORD18B-201ENST00000365659 72 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 MIR4263-201ENST00000584745 83 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 MIR548AZ-201ENST00000616567 95 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 FTX_2.1-201ENST00000618816 94 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 uc_338.36-201ENST00000622331 158 ntBASIC-0.7□□□□□ -2.52
HLA-DPA1P20036 RNU6-284P-201ENST00000411105 106 ntBASIC-0.71□□□□□ -2.52
HLA-DPA1P20036 RNA5SP395-201ENST00000516567 118 ntBASIC-0.71□□□□□ -2.52
HLA-DPA1P20036 AL117187.1-201ENST00000555482 181 ntBASIC-0.71□□□□□ -2.52
HLA-DPA1P20036 MIR6507-201ENST00000613630 70 ntBASIC-0.71□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 SNORD115-35-201ENST00000365122 82 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 RNU6-571P-201ENST00000384128 107 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 SNORD58.1-201ENST00000391313 66 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 MIR376B-201ENST00000614515 100 ntBASIC-0.72□□□□□ -2.52
HLA-DPA1P20036 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RNA5SP205-201ENST00000364653 136 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RNU6-616P-201ENST00000384353 107 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 MIR604-201ENST00000384880 94 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RNU6-918P-201ENST00000391219 106 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RNU6-588P-201ENST00000410281 105 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RNU7-106P-201ENST00000459514 67 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 MIR4432-201ENST00000581823 84 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 MIR4473-201ENST00000583731 91 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 RN7SL660P-201ENST00000614852 299 ntBASIC-0.73□□□□□ -2.53
HLA-DPA1P20036 U8.6-201ENST00000364939 135 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 RNU6-480P-201ENST00000384332 107 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 RNA5SP451-201ENST00000410588 110 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 Z95118.1-201ENST00000421372 247 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 AC114755.3-201ENST00000481111 251 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 RNU6-758P-201ENST00000516292 89 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 AC008737.2-201ENST00000599446 118 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 uc_338.10-201ENST00000621872 182 ntBASIC-0.74□□□□□ -2.53
HLA-DPA1P20036 RNU6-312P-201ENST00000364629 107 ntBASIC-0.75□□□□□ -2.53
HLA-DPA1P20036 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.75□□□□□ -2.53
HLA-DPA1P20036 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.75□□□□□ -2.53
HLA-DPA1P20036 MIR3646-201ENST00000578301 84 ntBASIC-0.75□□□□□ -2.53
HLA-DPA1P20036 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 MIR1265-201ENST00000408444 86 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 RNU4-71P-201ENST00000516258 113 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 RNU7-188P-201ENST00000517063 64 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 AC069503.3-201ENST00000618674 145 ntBASIC-0.76□□□□□ -2.53
HLA-DPA1P20036 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms