Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 Y_RNA.448-201ENST00000384185 108 ntBASIC-3.87□□□□□ -3.03
VCANP13611 AL118496.2-201ENST00000448300 230 ntBASIC-3.87□□□□□ -3.03
VCANP13611 RNU2-35P-201ENST00000516446 142 ntBASIC-3.87□□□□□ -3.03
VCANP13611 MIR4773-1-201ENST00000637203 78 ntBASIC-3.87□□□□□ -3.03
VCANP13611 AC073539.2-201ENST00000597113 165 ntBASIC-3.88□□□□□ -3.03
VCANP13611 RNU6-755P-201ENST00000364400 103 ntBASIC-3.88□□□□□ -3.03
VCANP13611 SNORD58A-201ENST00000383875 65 ntBASIC-3.88□□□□□ -3.03
VCANP13611 RNU6-957P-201ENST00000363652 99 ntBASIC-3.88□□□□□ -3.03
VCANP13611 RNU6-445P-201ENST00000516949 107 ntBASIC-3.88□□□□□ -3.03
VCANP13611 AC245884.10-201ENST00000597355 337 ntBASIC-3.88□□□□□ -3.03
VCANP13611 AL512427.1-201ENST00000618593 349 ntBASIC-3.88□□□□□ -3.03
VCANP13611 SNORA22.1-201ENST00000362701 134 ntBASIC-3.89□□□□□ -3.03
VCANP13611 RNU6-946P-201ENST00000383878 107 ntBASIC-3.89□□□□□ -3.03
VCANP13611 RNU6-129P-201ENST00000391022 107 ntBASIC-3.89□□□□□ -3.03
VCANP13611 AP002392.1-201ENST00000537692 208 ntBASIC-3.89□□□□□ -3.03
VCANP13611 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-3.89□□□□□ -3.03
VCANP13611 AC092794.2-201ENST00000620933 563 ntBASIC-3.89□□□□□ -3.03
VCANP13611 MTCO2P21-201ENST00000419780 677 ntBASIC-3.89□□□□□ -3.03
VCANP13611 RNU6-656P-201ENST00000516785 107 ntBASIC-3.89□□□□□ -3.03
VCANP13611 AP001362.1-201ENST00000625165 124 ntBASIC-3.89□□□□□ -3.03
VCANP13611 MTND5P26-201ENST00000426018 1752 ntBASIC-3.9□□□□□ -3.03
VCANP13611 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-3.9□□□□□ -3.03
VCANP13611 RNU6-387P-201ENST00000411331 105 ntBASIC-3.9□□□□□ -3.03
VCANP13611 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.9□□□□□ -3.03
VCANP13611 RNU6-191P-201ENST00000516295 94 ntBASIC-3.9□□□□□ -3.03
VCANP13611 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-3.91□□□□□ -3.04
VCANP13611 SNORD116-9-201ENST00000384000 95 ntBASIC-3.91□□□□□ -3.04
VCANP13611 SNORD116-3-201ENST00000384287 95 ntBASIC-3.91□□□□□ -3.04
VCANP13611 SNORD116-8-201ENST00000384365 95 ntBASIC-3.91□□□□□ -3.04
VCANP13611 SNORD116-7-201ENST00000384404 95 ntBASIC-3.91□□□□□ -3.04
VCANP13611 SNORD116-5-201ENST00000384462 95 ntBASIC-3.91□□□□□ -3.04
VCANP13611 AL691482.2-201ENST00000457453 84 ntBASIC-3.91□□□□□ -3.04
VCANP13611 AC005014.3-201ENST00000605985 190 ntBASIC-3.91□□□□□ -3.04
VCANP13611 U4.4-201ENST00000620626 117 ntBASIC-3.91□□□□□ -3.04
VCANP13611 AL445984.1-201ENST00000637834 659 ntBASIC-3.91□□□□□ -3.04
VCANP13611 MTND3P25-201ENST00000509243 135 ntBASIC-3.92□□□□□ -3.04
VCANP13611 RNU6-864P-201ENST00000516256 108 ntBASIC-3.92□□□□□ -3.04
VCANP13611 RNU6-827P-201ENST00000365553 106 ntBASIC-3.92□□□□□ -3.04
VCANP13611 MIR3140-201ENST00000583685 90 ntBASIC-3.92□□□□□ -3.04
VCANP13611 MTND4LP18-201ENST00000526864 291 ntBASIC-3.93□□□□□ -3.04
VCANP13611 AC012409.4-201ENST00000612923 249 ntBASIC-3.93□□□□□ -3.04
VCANP13611 AC021613.1-201ENST00000623880 111 ntBASIC-3.93□□□□□ -3.04
VCANP13611 RNU6-601P-201ENST00000384540 107 ntBASIC-3.93□□□□□ -3.04
VCANP13611 MIR450B-201ENST00000401182 78 ntBASIC-3.93□□□□□ -3.04
VCANP13611 RNU6-1209P-201ENST00000363655 107 ntBASIC-3.93□□□□□ -3.04
VCANP13611 RNU6-744P-201ENST00000365557 107 ntBASIC-3.93□□□□□ -3.04
VCANP13611 SNORA32-201ENST00000384072 121 ntBASIC-3.94□□□□□ -3.04
VCANP13611 SNORD113-2-201ENST00000391082 72 ntBASIC-3.94□□□□□ -3.04
VCANP13611 MIR2681-201ENST00000581814 105 ntBASIC-3.94□□□□□ -3.04
VCANP13611 AL117351.1-201ENST00000438864 766 ntBASIC-3.94□□□□□ -3.04
VCANP13611 AC107934.1-201ENST00000522215 217 ntBASIC-3.94□□□□□ -3.04
VCANP13611 RNU6-698P-201ENST00000363523 107 ntBASIC-3.94□□□□□ -3.04
VCANP13611 RNU6-34P-201ENST00000364874 107 ntBASIC-3.94□□□□□ -3.04
VCANP13611 Z99129.1-201ENST00000612510 255 ntBASIC-3.94□□□□□ -3.04
VCANP13611 Y_RNA.98-201ENST00000363109 102 ntBASIC-3.95□□□□□ -3.04
VCANP13611 MIR16-1-201ENST00000385271 89 ntBASIC-3.95□□□□□ -3.04
VCANP13611 RNU6-607P-201ENST00000411283 108 ntBASIC-3.95□□□□□ -3.04
VCANP13611 RNU6-289P-201ENST00000364093 107 ntBASIC-3.95□□□□□ -3.04
VCANP13611 Y_RNA.454-201ENST00000384224 113 ntBASIC-3.95□□□□□ -3.04
VCANP13611 Y_RNA.521-201ENST00000384560 114 ntBASIC-3.95□□□□□ -3.04
VCANP13611 RNU7-113P-201ENST00000459273 62 ntBASIC-3.95□□□□□ -3.04
VCANP13611 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.96□□□□□ -3.04
VCANP13611 SNORD116-16-201ENST00000384533 92 ntBASIC-3.96□□□□□ -3.04
VCANP13611 AC097639.2-201ENST00000603159 172 ntBASIC-3.96□□□□□ -3.04
VCANP13611 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.96□□□□□ -3.04
VCANP13611 RNU6-280P-201ENST00000364145 104 ntBASIC-3.96□□□□□ -3.04
VCANP13611 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.96□□□□□ -3.04
VCANP13611 RNU7-115P-201ENST00000516433 55 ntBASIC-3.96□□□□□ -3.04
VCANP13611 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-3.96□□□□□ -3.04
VCANP13611 RNU5A-8P-201ENST00000364102 114 ntBASIC-3.97□□□□□ -3.04
VCANP13611 RNY4P18-201ENST00000391107 89 ntBASIC-3.97□□□□□ -3.04
VCANP13611 RNU7-149P-201ENST00000516739 59 ntBASIC-3.97□□□□□ -3.04
VCANP13611 RNU6-365P-201ENST00000517113 106 ntBASIC-3.97□□□□□ -3.04
VCANP13611 RNU6-1106P-201ENST00000390845 107 ntBASIC-3.97□□□□□ -3.05
VCANP13611 AC092954.2-201ENST00000609103 430 ntBASIC-3.98□□□□□ -3.05
VCANP13611 AL133173.2-201ENST00000614270 90 ntBASIC-3.98□□□□□ -3.05
VCANP13611 AC022140.2-201ENST00000623500 188 ntBASIC-3.98□□□□□ -3.05
VCANP13611 SNORD115.2-201ENST00000391126 59 ntBASIC-3.99□□□□□ -3.05
VCANP13611 RNU6-192P-201ENST00000391253 100 ntBASIC-3.99□□□□□ -3.05
VCANP13611 RNA5SP136-201ENST00000410906 107 ntBASIC-3.99□□□□□ -3.05
VCANP13611 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-3.99□□□□□ -3.05
VCANP13611 MIR494-201ENST00000349529 81 ntBASIC-3.99□□□□□ -3.05
VCANP13611 SNORD11-201ENST00000459124 84 ntBASIC-3.99□□□□□ -3.05
VCANP13611 RNU7-160P-201ENST00000516660 62 ntBASIC-3.99□□□□□ -3.05
VCANP13611 RNU6-541P-201ENST00000384709 110 ntBASIC-3.99□□□□□ -3.05
VCANP13611 UBL5P4-201ENST00000562584 236 ntBASIC-3.99□□□□□ -3.05
VCANP13611 SNORD45.2-201ENST00000363552 72 ntBASIC-4□□□□□ -3.05
VCANP13611 MIR4536-1-201ENST00000583537 88 ntBASIC-4□□□□□ -3.05
VCANP13611 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-4□□□□□ -3.05
VCANP13611 RNU6-1296P-201ENST00000383879 107 ntBASIC-4□□□□□ -3.05
VCANP13611 MIR545-201ENST00000385085 106 ntBASIC-4□□□□□ -3.05
VCANP13611 Y_RNA.683-201ENST00000516508 93 ntBASIC-4□□□□□ -3.05
VCANP13611 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.01□□□□□ -3.05
VCANP13611 SNORD115-30-201ENST00000364117 82 ntBASIC-4.01□□□□□ -3.05
VCANP13611 RNU6-587P-201ENST00000391282 106 ntBASIC-4.01□□□□□ -3.05
VCANP13611 MTND4LP7-201ENST00000431728 294 ntBASIC-4.01□□□□□ -3.05
VCANP13611 RNU7-174P-201ENST00000516248 59 ntBASIC-4.01□□□□□ -3.05
VCANP13611 AC093729.1-201ENST00000513074 128 ntBASIC-4.02□□□□□ -3.05
VCANP13611 SNORD116-11-201ENST00000383882 92 ntBASIC-4.02□□□□□ -3.05
VCANP13611 RNU6-1016P-201ENST00000516689 94 ntBASIC-4.02□□□□□ -3.05
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms