Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-1049P-201ENST00000516414 107 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 SNORA25.16-201ENST00000516741 121 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 SNORA81.3-201ENST00000517283 198 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 MIR4639-201ENST00000584938 69 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 RNU6-151P-201ENST00000364158 107 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 RNU6-200P-201ENST00000364743 107 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 SNORD28-201ENST00000384706 75 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 RNU4-83P-201ENST00000410863 133 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 Y_RNA.686-201ENST00000516548 134 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 RNA5SP94-201ENST00000516917 108 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 AC108081.1-201ENST00000604358 221 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 MIR3658-201ENST00000636291 56 ntBASIC0.13□□□□□ -2.39
COL11A1P12107 Y_RNA.13-201ENST00000362403 112 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 Y_RNA.240-201ENST00000364469 95 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 Y_RNA.441-201ENST00000384123 112 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 RNU6-80P-201ENST00000384195 107 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 Y_RNA.457-201ENST00000384237 111 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 Y_RNA.567-201ENST00000384736 106 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 MIR644A-201ENST00000385262 94 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 PCNPP3-201ENST00000393579 471 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 RNU6-735P-201ENST00000410612 107 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 TRAJ51-201ENST00000504127 63 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 RNU6-138P-201ENST00000515952 107 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 RNY4P20-201ENST00000516678 93 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 RNU6-794P-201ENST00000517261 64 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 DEFB131E-201ENST00000532329 154 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 AC105081.1-201ENST00000617727 106 ntBASIC0.12□□□□□ -2.39
COL11A1P12107 Y_RNA.35-201ENST00000362601 101 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 Y_RNA.144-201ENST00000363521 113 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNY1P2-201ENST00000364820 117 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNU4-69P-201ENST00000410677 143 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNU6-394P-201ENST00000410735 107 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 SNORD71-201ENST00000411292 86 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RPS29P8-201ENST00000445109 171 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 SNORD57-201ENST00000448188 72 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNU7-164P-201ENST00000459221 62 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 RNA5SP67-201ENST00000516422 131 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 U6.109-201ENST00000636749 87 ntBASIC0.11□□□□□ -2.39
COL11A1P12107 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 Y_RNA.49-201ENST00000362714 112 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.1□□□□□ -2.39
COL11A1P12107 MIR3144-201ENST00000579460 79 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 AC073869.9-201ENST00000641610 120 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 Y_RNA.29-201ENST00000362570 113 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 MT-TI-201ENST00000387365 69 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 MIR759-201ENST00000390224 91 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 RNU7-161P-201ENST00000517289 62 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 Y_RNA.778-201ENST00000620203 90 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 AC091304.10-201ENST00000641554 121 ntBASIC0.1□□□□□ -2.39
COL11A1P12107 Y_RNA.56-201ENST00000362798 112 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.298-201ENST00000364960 107 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.398-201ENST00000383952 99 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 SNORA72.6-201ENST00000384520 129 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.521-201ENST00000384560 114 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 RNU6-1104P-201ENST00000384723 104 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.610-201ENST00000410681 103 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 AC108740.1-201ENST00000498629 225 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 RNU7-2P-201ENST00000516096 62 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.690-201ENST00000516603 95 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 MIR548H5-201ENST00000580314 60 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 MIR3671-201ENST00000580455 88 ntBASIC0.09□□□□□ -2.39
COL11A1P12107 Y_RNA.120-201ENST00000363304 110 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNA5SP245-201ENST00000364239 121 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNU6-647P-201ENST00000364243 107 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 Y_RNA.362-201ENST00000365518 110 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 AC069271.1-201ENST00000445577 156 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 AL359881.1-201ENST00000602916 267 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNU7-10P-201ENST00000607194 63 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 AC087741.2-201ENST00000619415 172 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
COL11A1P12107 Y_RNA.119-201ENST00000363301 96 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 Y_RNA.497-201ENST00000384447 98 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 Y_RNA.507-201ENST00000384500 99 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 Y_RNA.580-201ENST00000391004 95 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNU6-460P-201ENST00000391158 108 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 MIR548L-201ENST00000408303 86 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNU7-197P-201ENST00000458836 62 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 RNU6-182P-201ENST00000516970 105 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
COL11A1P12107 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.08□□□□□ -2.4
COL11A1P12107 SNORD115-19-201ENST00000363098 82 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 SNORD115-18-201ENST00000363293 82 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 SNORD115-17-201ENST00000364612 82 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 Y_RNA.343-201ENST00000365354 112 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 RNA5SP136-201ENST00000410906 107 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 AC108059.2-201ENST00000434626 151 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 Y_RNA.651-201ENST00000459380 103 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms