Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU7-2P-201ENST00000516096 62 ntBASIC0.28□□□□□ -2.36
TOP1P11387 RNA5SP47-201ENST00000517230 109 ntBASIC0.28□□□□□ -2.36
TOP1P11387 U7.2-201ENST00000607576 63 ntBASIC0.28□□□□□ -2.36
TOP1P11387 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
TOP1P11387 SNORD115-19-201ENST00000363098 82 ntBASIC0.27□□□□□ -2.37
TOP1P11387 SNORD115-18-201ENST00000363293 82 ntBASIC0.27□□□□□ -2.37
TOP1P11387 Y_RNA.127-201ENST00000363386 109 ntBASIC0.27□□□□□ -2.37
TOP1P11387 Y_RNA.198-201ENST00000364013 98 ntBASIC0.27□□□□□ -2.37
TOP1P11387 SNORD115-17-201ENST00000364612 82 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNY1P5-201ENST00000383890 115 ntBASIC0.27□□□□□ -2.37
TOP1P11387 MT-TR-201ENST00000387439 65 ntBASIC0.27□□□□□ -2.37
TOP1P11387 MIR1263-201ENST00000408324 86 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNU6-257P-201ENST00000410238 98 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNU7-48P-201ENST00000458875 63 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNU7-6P-201ENST00000516845 62 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNU6-1234P-201ENST00000516877 103 ntBASIC0.27□□□□□ -2.37
TOP1P11387 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
TOP1P11387 MIR6779-201ENST00000617283 64 ntBASIC0.27□□□□□ -2.37
TOP1P11387 RNU6-235P-201ENST00000362644 107 ntBASIC0.26□□□□□ -2.37
TOP1P11387 Y_RNA.328-201ENST00000365208 113 ntBASIC0.26□□□□□ -2.37
TOP1P11387 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
TOP1P11387 RNA5SP268-201ENST00000516828 124 ntBASIC0.26□□□□□ -2.37
TOP1P11387 MIR4500-201ENST00000579472 76 ntBASIC0.26□□□□□ -2.37
TOP1P11387 MIR376B-201ENST00000614515 100 ntBASIC0.26□□□□□ -2.37
TOP1P11387 MIR1255B1-201ENST00000636325 63 ntBASIC0.26□□□□□ -2.37
TOP1P11387 MIR924-201ENST00000638017 53 ntBASIC0.26□□□□□ -2.37
TOP1P11387 Y_RNA.98-201ENST00000363109 102 ntBASIC0.25□□□□□ -2.37
TOP1P11387 SNORD77B-201ENST00000391112 67 ntBASIC0.25□□□□□ -2.37
TOP1P11387 RNA5SP136-201ENST00000410906 107 ntBASIC0.25□□□□□ -2.37
TOP1P11387 SUMO1P3-201ENST00000439961 304 ntBASIC0.25□□□□□ -2.37
TOP1P11387 AC244505.6-201ENST00000452829 130 ntBASIC0.25□□□□□ -2.37
TOP1P11387 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
TOP1P11387 SCARNA16.5-201ENST00000517114 183 ntBASIC0.25□□□□□ -2.37
TOP1P11387 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
TOP1P11387 MIR4639-201ENST00000584938 69 ntBASIC0.25□□□□□ -2.37
TOP1P11387 MIR7107-201ENST00000611489 80 ntBASIC0.25□□□□□ -2.37
TOP1P11387 AC244669.1-204ENST00000621564 178 ntBASIC0.25□□□□□ -2.37
TOP1P11387 Y_RNA.528-201ENST00000384575 108 ntBASIC0.24□□□□□ -2.37
TOP1P11387 MIR34C-201ENST00000384831 77 ntBASIC0.24□□□□□ -2.37
TOP1P11387 Y_RNA.630-201ENST00000411370 108 ntBASIC0.24□□□□□ -2.37
TOP1P11387 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
TOP1P11387 TRAJ51-201ENST00000504127 63 ntBASIC0.24□□□□□ -2.37
TOP1P11387 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
TOP1P11387 RNU6-521P-201ENST00000516663 105 ntBASIC0.24□□□□□ -2.37
TOP1P11387 MIR3668-201ENST00000582138 75 ntBASIC0.24□□□□□ -2.37
TOP1P11387 MIR101-2-201ENST00000362195 79 ntBASIC0.23□□□□□ -2.37
TOP1P11387 SNORD58C-201ENST00000365223 64 ntBASIC0.23□□□□□ -2.37
TOP1P11387 RNU6-209P-201ENST00000384118 107 ntBASIC0.23□□□□□ -2.37
TOP1P11387 SNORA40-201ENST00000388090 126 ntBASIC0.23□□□□□ -2.37
TOP1P11387 Y_RNA.586-201ENST00000391146 98 ntBASIC0.23□□□□□ -2.37
TOP1P11387 BX276092.1-201ENST00000427368 251 ntBASIC0.23□□□□□ -2.37
TOP1P11387 AL353813.1-201ENST00000440700 253 ntBASIC0.23□□□□□ -2.37
TOP1P11387 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
TOP1P11387 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
TOP1P11387 RNU6-135P-201ENST00000516769 101 ntBASIC0.23□□□□□ -2.37
TOP1P11387 MIR3163-201ENST00000581592 73 ntBASIC0.23□□□□□ -2.37
TOP1P11387 TUG1_4.1-201ENST00000619464 181 ntBASIC0.23□□□□□ -2.37
TOP1P11387 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
TOP1P11387 AP001362.1-201ENST00000625165 124 ntBASIC0.23□□□□□ -2.37
TOP1P11387 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
TOP1P11387 Y_RNA.49-201ENST00000362714 112 ntBASIC0.22□□□□□ -2.37
TOP1P11387 Y_RNA.344-201ENST00000365381 112 ntBASIC0.22□□□□□ -2.37
TOP1P11387 Y_RNA.360-201ENST00000365512 102 ntBASIC0.22□□□□□ -2.37
TOP1P11387 Y_RNA.525-201ENST00000384570 113 ntBASIC0.22□□□□□ -2.37
TOP1P11387 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.22□□□□□ -2.37
TOP1P11387 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
TOP1P11387 AC138869.1-201ENST00000568623 124 ntBASIC0.22□□□□□ -2.37
TOP1P11387 MIR4514-201ENST00000581410 57 ntBASIC0.22□□□□□ -2.37
TOP1P11387 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
TOP1P11387 SNORD115-24-201ENST00000363528 82 ntBASIC0.21□□□□□ -2.38
TOP1P11387 RNA5SP403-201ENST00000363598 108 ntBASIC0.21□□□□□ -2.38
TOP1P11387 Y_RNA.343-201ENST00000365354 112 ntBASIC0.21□□□□□ -2.38
TOP1P11387 MIR548D2-201ENST00000384955 97 ntBASIC0.21□□□□□ -2.38
TOP1P11387 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
TOP1P11387 SNORD71-201ENST00000411292 86 ntBASIC0.21□□□□□ -2.38
TOP1P11387 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
TOP1P11387 RNU6-1006P-201ENST00000516998 103 ntBASIC0.21□□□□□ -2.38
TOP1P11387 MIR548H5-201ENST00000580314 60 ntBASIC0.21□□□□□ -2.38
TOP1P11387 RNU1-29P-201ENST00000606574 126 ntBASIC0.21□□□□□ -2.38
TOP1P11387 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
TOP1P11387 AC025166.1-201ENST00000612411 163 ntBASIC0.21□□□□□ -2.38
TOP1P11387 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
TOP1P11387 AC091304.10-201ENST00000641554 121 ntBASIC0.21□□□□□ -2.38
TOP1P11387 MTND5P18-201ENST00000445624 1801 ntBASIC0.21□□□□□ -2.38
TOP1P11387 Y_RNA.213-201ENST00000364178 111 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-726P-201ENST00000364680 107 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-865P-201ENST00000364772 107 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-1126P-201ENST00000384002 107 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-187P-201ENST00000384139 106 ntBASIC0.2□□□□□ -2.38
TOP1P11387 MIR635-201ENST00000384830 98 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
TOP1P11387 MIR548I2-201ENST00000408348 149 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU7-107P-201ENST00000459121 61 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU7-106P-201ENST00000459514 67 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-971P-201ENST00000516920 106 ntBASIC0.2□□□□□ -2.38
TOP1P11387 MIR8087-201ENST00000612745 78 ntBASIC0.2□□□□□ -2.38
TOP1P11387 RNU6-363P-201ENST00000362895 105 ntBASIC0.19□□□□□ -2.38
TOP1P11387 RNU6-774P-201ENST00000363238 107 ntBASIC0.19□□□□□ -2.38
TOP1P11387 RNU6-1229P-201ENST00000364295 107 ntBASIC0.19□□□□□ -2.38
TOP1P11387 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms