Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC018659.1-201ENST00000551083 169 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 AC132825.6-201ENST00000638861 357 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 Y_RNA.563-201ENST00000384707 108 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 MIR34C-201ENST00000384831 77 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 MIR548A3-201ENST00000385297 97 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 SNORD33.1-201ENST00000516213 88 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 RNU6-1018P-201ENST00000516577 106 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 AC007012.1-201ENST00000567192 175 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 AL670379.3-201ENST00000605040 251 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 AL162726.3-218ENST00000636401 95 ntBASIC0.73□□□□□ -2.29
PF4V1P10720 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PF4V1P10720 Y_RNA.85-201ENST00000363014 111 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 RNU6-409P-201ENST00000384114 104 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 MIR598-201ENST00000384868 97 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 MIR548I2-201ENST00000408348 149 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 SNORA7.5-201ENST00000410672 110 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
PF4V1P10720 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PF4V1P10720 Y_RNA.155-201ENST00000363632 101 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 RNU6-1117P-201ENST00000384525 104 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 MIR644A-201ENST00000385262 94 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 RNU6-816P-201ENST00000390914 107 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 RNU6-1268P-201ENST00000391214 107 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 RNU6-1239P-201ENST00000391310 107 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 AC138869.1-201ENST00000568623 124 ntBASIC0.71□□□□□ -2.3
PF4V1P10720 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.71□□□□□ -2.3
PF4V1P10720 RNU6-1313P-201ENST00000362622 102 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 SNORD18A-201ENST00000363753 72 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 Y_RNA.309-201ENST00000365046 111 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 RNU6-571P-201ENST00000384128 107 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 RNU6-679P-201ENST00000391003 106 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 AC092634.7-201ENST00000621022 103 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
PF4V1P10720 RNU6-1229P-201ENST00000364295 107 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 Y_RNA.353-201ENST00000365440 108 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 MIR635-201ENST00000384830 98 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 RN7SKP12-201ENST00000516275 143 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 RNU6-62P-201ENST00000516526 102 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
PF4V1P10720 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 MIR4639-201ENST00000584938 69 ntBASIC0.69□□□□□ -2.3
PF4V1P10720 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.69□□□□□ -2.3
PF4V1P10720 Y_RNA.567-201ENST00000384736 106 ntBASIC0.68□□□□□ -2.3
PF4V1P10720 AC092628.1-201ENST00000436250 252 ntBASIC0.68□□□□□ -2.3
PF4V1P10720 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
PF4V1P10720 RNA5SP480-201ENST00000516840 109 ntBASIC0.68□□□□□ -2.3
PF4V1P10720 SNORA63.5-201ENST00000363548 123 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 RNA5SP245-201ENST00000364239 121 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 BX276092.1-201ENST00000427368 251 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 AC244505.6-201ENST00000452829 130 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 AL035470.1-201ENST00000622571 220 ntBASIC0.67□□□□□ -2.3
PF4V1P10720 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
PF4V1P10720 Y_RNA.261-201ENST00000364631 102 ntBASIC0.66□□□□□ -2.3
PF4V1P10720 MIR548A1-201ENST00000385041 97 ntBASIC0.66□□□□□ -2.3
PF4V1P10720 SNRPGP12-201ENST00000449481 213 ntBASIC0.66□□□□□ -2.3
PF4V1P10720 AL365222.1-201ENST00000614661 98 ntBASIC0.66□□□□□ -2.3
PF4V1P10720 Y_RNA.36-201ENST00000362602 112 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 SNORD38.1-201ENST00000363863 68 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 RNU6-22P-201ENST00000384355 107 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 SNORD28-201ENST00000384706 75 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PF4V1P10720 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 AL353813.1-201ENST00000440700 253 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 RNU6-789P-201ENST00000517105 102 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
PF4V1P10720 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 SNORD113-1-201ENST00000365321 69 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNU6-880P-201ENST00000384526 107 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 MIR7-2-201ENST00000384970 110 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 MIR519A1-201ENST00000385257 85 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 SNORD71-201ENST00000411292 86 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNU6-479P-201ENST00000516348 105 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNU6-1006P-201ENST00000516998 103 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 SCARNA16.5-201ENST00000517114 183 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 RNA5SP47-201ENST00000517230 109 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 MTND5P40-201ENST00000559945 246 ntBASIC0.64□□□□□ -2.31
PF4V1P10720 Y_RNA.49-201ENST00000362714 112 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 RNU6-1201P-201ENST00000384227 107 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 RNU6-1168P-201ENST00000390831 104 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 AC097635.1-201ENST00000450678 155 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 AL442128.1-201ENST00000615151 90 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
PF4V1P10720 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
PF4V1P10720 RNA5SP205-201ENST00000364653 136 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms