Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-355P-201ENST00000410427 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-791P-201ENST00000410467 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-705P-201ENST00000410601 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-1100P-201ENST00000410691 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-860P-201ENST00000410860 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU4-83P-201ENST00000410863 133 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DOAP06340 RNU6-1244P-201ENST00000363614 108 ntBASIC1.34□□□□□ -2.19
HLA-DOAP06340 Y_RNA.567-201ENST00000384736 106 ntBASIC1.34□□□□□ -2.19
HLA-DOAP06340 RNU6-531P-201ENST00000516694 104 ntBASIC1.34□□□□□ -2.19
HLA-DOAP06340 AC026421.1-201ENST00000519101 163 ntBASIC1.34□□□□□ -2.19
HLA-DOAP06340 RNU6-90P-201ENST00000606352 106 ntBASIC1.34□□□□□ -2.19
HLA-DOAP06340 AC023934.1-201ENST00000574529 2389 ntBASIC1.34□□□□□ -2.2
HLA-DOAP06340 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 RNU6-403P-201ENST00000363163 104 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 Y_RNA.173-201ENST00000363776 113 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 SNORD113.3-201ENST00000364630 78 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 RNU1-36P-201ENST00000365130 165 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 Y_RNA.388-201ENST00000383919 113 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 SNORA72.6-201ENST00000384520 129 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 MT-TF-201ENST00000387314 71 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 RNU6-887P-201ENST00000410660 100 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 RNU7-185P-201ENST00000459215 60 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 Y_RNA.705-201ENST00000516862 110 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 AC062037.1-201ENST00000605302 128 ntBASIC1.33□□□□□ -2.2
HLA-DOAP06340 SNORD114-22-201ENST00000365423 72 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 MIR518E-201ENST00000385252 88 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.32□□□□□ -2.2
HLA-DOAP06340 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 MIR4771-2-201ENST00000577758 74 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 MIR4771-1-201ENST00000582617 74 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 AC025521.1-201ENST00000621624 286 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HLA-DOAP06340 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
HLA-DOAP06340 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HLA-DOAP06340 HSBP1P2-201ENST00000299671 229 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 RNU6-934P-201ENST00000365154 107 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 RNU6-1134P-201ENST00000365156 101 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 SNORD58A-201ENST00000383875 65 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 MIR181B2-201ENST00000385004 89 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 Y_RNA.593-201ENST00000410292 98 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 MIR18B-201ENST00000454574 71 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
HLA-DOAP06340 RNU6-369P-201ENST00000362515 102 ntBASIC1.3□□□□□ -2.2
HLA-DOAP06340 Y_RNA.508-201ENST00000384502 114 ntBASIC1.3□□□□□ -2.2
HLA-DOAP06340 RNU6-267P-201ENST00000516714 103 ntBASIC1.3□□□□□ -2.2
HLA-DOAP06340 RNU6-850P-201ENST00000516934 103 ntBASIC1.3□□□□□ -2.2
HLA-DOAP06340 MIR4439-201ENST00000583746 80 ntBASIC1.3□□□□□ -2.2
HLA-DOAP06340 MIR494-201ENST00000349529 81 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 Y_RNA.13-201ENST00000362403 112 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 Y_RNA.17-201ENST00000362433 111 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DOAP06340 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 Y_RNA.558-201ENST00000384685 113 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 RNU6-972P-201ENST00000391208 107 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 AL513043.2-201ENST00000573941 143 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 AC013244.2-201ENST00000603396 103 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
HLA-DOAP06340 RNU1-93P-201ENST00000364704 169 ntBASIC1.28□□□□□ -2.2
HLA-DOAP06340 RNU6-402P-201ENST00000410678 103 ntBASIC1.28□□□□□ -2.2
HLA-DOAP06340 RNY4P29-201ENST00000410801 97 ntBASIC1.28□□□□□ -2.2
HLA-DOAP06340 SNRPGP12-201ENST00000449481 213 ntBASIC1.28□□□□□ -2.2
HLA-DOAP06340 Y_RNA.73-201ENST00000362910 113 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 MIR1257-201ENST00000408490 117 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 RNU6-592P-201ENST00000411333 103 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 MIR8066-201ENST00000617280 78 ntBASIC1.27□□□□□ -2.21
HLA-DOAP06340 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DOAP06340 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DOAP06340 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
HLA-DOAP06340 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
HLA-DOAP06340 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
HLA-DOAP06340 MIR4676-201ENST00000583078 72 ntBASIC1.26□□□□□ -2.21
HLA-DOAP06340 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
HLA-DOAP06340 RNY1P4-201ENST00000384595 115 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 MIR516A2-201ENST00000384888 90 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 MIR516A1-201ENST00000385033 90 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 MIR125B2-201ENST00000385128 89 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 SNORA26.2-201ENST00000390922 122 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 Y_RNA.609-201ENST00000410669 89 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 RPS26P5-201ENST00000418544 335 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 RNU7-106P-201ENST00000459514 67 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 AC008608.1-201ENST00000603910 127 ntBASIC1.25□□□□□ -2.21
HLA-DOAP06340 Y_RNA.57-201ENST00000362806 113 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms