Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRT1P04264 ZNF355P-201ENST00000427301 3216 ntBASIC1.92□□□□□ -2.1
KRT1P04264 Y_RNA.164-201ENST00000363709 102 ntBASIC1.92□□□□□ -2.1
KRT1P04264 MIR154-201ENST00000385243 84 ntBASIC1.92□□□□□ -2.1
KRT1P04264 RNA5SP458-201ENST00000516188 119 ntBASIC1.92□□□□□ -2.1
KRT1P04264 PRELID3BP2-201ENST00000605362 201 ntBASIC1.92□□□□□ -2.1
KRT1P04264 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
KRT1P04264 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRT1P04264 Y_RNA.226-201ENST00000364337 114 ntBASIC1.91□□□□□ -2.1
KRT1P04264 RNU6-396P-201ENST00000365369 105 ntBASIC1.91□□□□□ -2.1
KRT1P04264 RNU6-1241P-201ENST00000384536 107 ntBASIC1.91□□□□□ -2.1
KRT1P04264 MIR518E-201ENST00000385252 88 ntBASIC1.91□□□□□ -2.1
KRT1P04264 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
KRT1P04264 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.91□□□□□ -2.1
KRT1P04264 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
KRT1P04264 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.91□□□□□ -2.1
KRT1P04264 MIR664A-201ENST00000626086 82 ntBASIC1.91□□□□□ -2.1
KRT1P04264 SNORA8.1-201ENST00000384250 140 ntBASIC1.9□□□□□ -2.11
KRT1P04264 MIR30A-201ENST00000385092 71 ntBASIC1.9□□□□□ -2.11
KRT1P04264 RNU6-663P-201ENST00000391105 106 ntBASIC1.9□□□□□ -2.11
KRT1P04264 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRT1P04264 AC093423.1-201ENST00000440817 142 ntBASIC1.9□□□□□ -2.11
KRT1P04264 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
KRT1P04264 MIR4264-201ENST00000583520 66 ntBASIC1.9□□□□□ -2.11
KRT1P04264 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
KRT1P04264 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRT1P04264 AL161722.3-201ENST00000605789 2983 ntBASIC1.9□□□□□ -2.11
KRT1P04264 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRT1P04264 MIRLET7F1-201ENST00000362202 87 ntBASIC1.89□□□□□ -2.11
KRT1P04264 Y_RNA.36-201ENST00000362602 112 ntBASIC1.89□□□□□ -2.11
KRT1P04264 RNU6-987P-201ENST00000384759 104 ntBASIC1.89□□□□□ -2.11
KRT1P04264 AL353997.5-201ENST00000618886 171 ntBASIC1.89□□□□□ -2.11
KRT1P04264 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.89□□□□□ -2.11
KRT1P04264 MIR30D-201ENST00000362283 70 ntBASIC1.88□□□□□ -2.11
KRT1P04264 RNU6-53P-201ENST00000365367 106 ntBASIC1.88□□□□□ -2.11
KRT1P04264 MT-TF-201ENST00000387314 71 ntBASIC1.88□□□□□ -2.11
KRT1P04264 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRT1P04264 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRT1P04264 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
KRT1P04264 RNU6-1165P-201ENST00000410119 107 ntBASIC1.88□□□□□ -2.11
KRT1P04264 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
KRT1P04264 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
KRT1P04264 SNORD111.1-201ENST00000516421 86 ntBASIC1.88□□□□□ -2.11
KRT1P04264 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
KRT1P04264 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
KRT1P04264 MIR6740-201ENST00000618268 113 ntBASIC1.88□□□□□ -2.11
KRT1P04264 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
KRT1P04264 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.88□□□□□ -2.11
KRT1P04264 RNU4-58P-201ENST00000363192 141 ntBASIC1.87□□□□□ -2.11
KRT1P04264 RNU6-957P-201ENST00000363652 99 ntBASIC1.87□□□□□ -2.11
KRT1P04264 RNY4P3-201ENST00000365254 95 ntBASIC1.87□□□□□ -2.11
KRT1P04264 MIR942-201ENST00000401111 86 ntBASIC1.87□□□□□ -2.11
KRT1P04264 RNU4-37P-201ENST00000410214 84 ntBASIC1.87□□□□□ -2.11
KRT1P04264 AC004965.1-201ENST00000413033 213 ntBASIC1.87□□□□□ -2.11
KRT1P04264 RNU7-106P-201ENST00000459514 67 ntBASIC1.87□□□□□ -2.11
KRT1P04264 RNU6-681P-201ENST00000364012 104 ntBASIC1.86□□□□□ -2.11
KRT1P04264 Y_RNA.338-201ENST00000365320 114 ntBASIC1.86□□□□□ -2.11
KRT1P04264 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
KRT1P04264 MTND4LP19-201ENST00000403051 166 ntBASIC1.86□□□□□ -2.11
KRT1P04264 SNORD63B-201ENST00000411005 70 ntBASIC1.86□□□□□ -2.11
KRT1P04264 RNU6-1194P-201ENST00000516208 104 ntBASIC1.86□□□□□ -2.11
KRT1P04264 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
KRT1P04264 Y_RNA.42-201ENST00000362660 108 ntBASIC1.85□□□□□ -2.11
KRT1P04264 SNORD115-31-201ENST00000365318 82 ntBASIC1.85□□□□□ -2.11
KRT1P04264 RNU6-203P-201ENST00000384038 104 ntBASIC1.85□□□□□ -2.11
KRT1P04264 MIR194-1-201ENST00000384892 85 ntBASIC1.85□□□□□ -2.11
KRT1P04264 MT-TN-201ENST00000387400 73 ntBASIC1.85□□□□□ -2.11
KRT1P04264 snoU13.17-201ENST00000458802 104 ntBASIC1.85□□□□□ -2.11
KRT1P04264 RNU7-62P-201ENST00000458856 62 ntBASIC1.85□□□□□ -2.11
KRT1P04264 MIR2115-201ENST00000516657 100 ntBASIC1.85□□□□□ -2.11
KRT1P04264 RNU6-531P-201ENST00000516694 104 ntBASIC1.85□□□□□ -2.11
KRT1P04264 RNU7-156P-201ENST00000517214 74 ntBASIC1.85□□□□□ -2.11
KRT1P04264 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
KRT1P04264 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
KRT1P04264 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
KRT1P04264 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRT1P04264 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
KRT1P04264 Y_RNA.239-201ENST00000364444 113 ntBASIC1.84□□□□□ -2.11
KRT1P04264 RNU6-1051P-201ENST00000365471 102 ntBASIC1.84□□□□□ -2.11
KRT1P04264 SNORD90-201ENST00000391145 111 ntBASIC1.84□□□□□ -2.11
KRT1P04264 MIR1287-201ENST00000408492 90 ntBASIC1.84□□□□□ -2.11
KRT1P04264 RNU7-10P-201ENST00000607194 63 ntBASIC1.84□□□□□ -2.11
KRT1P04264 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.84□□□□□ -2.11
KRT1P04264 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT1P04264 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
KRT1P04264 RNU6-340P-201ENST00000364005 107 ntBASIC1.83□□□□□ -2.12
KRT1P04264 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
KRT1P04264 RNU6-291P-201ENST00000384720 107 ntBASIC1.83□□□□□ -2.12
KRT1P04264 MIR1302-7-201ENST00000408841 72 ntBASIC1.83□□□□□ -2.12
KRT1P04264 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
KRT1P04264 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
KRT1P04264 MIR4491-201ENST00000581087 68 ntBASIC1.83□□□□□ -2.12
KRT1P04264 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
KRT1P04264 Y_RNA.207-201ENST00000364142 106 ntBASIC1.82□□□□□ -2.12
KRT1P04264 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
KRT1P04264 Y_RNA.371-201ENST00000365591 113 ntBASIC1.82□□□□□ -2.12
KRT1P04264 RNU6-154P-201ENST00000384306 106 ntBASIC1.82□□□□□ -2.12
KRT1P04264 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRT1P04264 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
KRT1P04264 RPL30P7-201ENST00000479312 323 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 230.4 ms