Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MIR409-201ENST00000362237 79 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 AC022137.1-201ENST00000483735 151 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU7-2P-201ENST00000516096 62 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU2-35P-201ENST00000516446 142 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU2-4P-201ENST00000606190 192 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 MIR216B-201ENST00000390186 82 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 RNU6-850P-201ENST00000516934 103 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 RNY1P9-201ENST00000532431 109 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 AC145423.2-201ENST00000610631 239 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 RNU6-103P-201ENST00000363686 107 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 SNORA49-201ENST00000386157 136 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 RNU6-381P-201ENST00000391259 108 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 MIR3115-201ENST00000577915 68 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR516A2-201ENST00000384888 90 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR516A1-201ENST00000385033 90 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR517B-201ENST00000385102 67 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 RNU6-876P-201ENST00000391295 104 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 AL121914.1-201ENST00000450188 156 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SERF1AP1-201ENST00000514575 187 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SNORA40.15-201ENST00000516884 107 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 MT-TL1-201ENST00000386347 75 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 RNU6-121P-201ENST00000410525 99 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 AP000533.3-201ENST00000447704 118 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.54□□□□□ -2.66
HLA-DRAP01903 MIR376B-201ENST00000614515 100 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 RNU6-277P-201ENST00000516272 106 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 AC009779.6-201ENST00000603972 165 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 MIR6854-201ENST00000614935 69 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 TRDV1-202ENST00000621643 102 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 MIR1302-1-201ENST00000637932 143 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 RNU4-32P-201ENST00000363404 141 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC140658.3-201ENST00000567603 271 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC021443.1-201ENST00000604478 211 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC087741.2-201ENST00000619415 172 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC073869.6-201ENST00000640656 341 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU4-17P-201ENST00000365598 141 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 SNORD38.2-201ENST00000384470 69 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU7-164P-201ENST00000459221 62 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 AC138907.4-201ENST00000570107 226 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 MIR4306-201ENST00000583390 91 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 SNORD27-201ENST00000363981 72 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SNORD115-35-201ENST00000365122 82 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 RNU6-243P-201ENST00000391140 107 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 MIR1252-201ENST00000408861 65 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SNORD2.1-201ENST00000458762 69 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SCARNA18B-201ENST00000458806 135 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 FGF7P6-202ENST00000451282 293 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 SNORD19B-201ENST00000459623 84 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 RNA5SP236-201ENST00000516169 116 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 MIR5704-201ENST00000584029 77 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 AL365265.1-201ENST00000621045 234 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 U6.100-201ENST00000636230 99 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 RNU6-770P-201ENST00000363929 105 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 RNU6-101P-201ENST00000410323 104 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms