Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MIR409-201ENST00000362237 79 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 AC022137.1-201ENST00000483735 151 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU7-2P-201ENST00000516096 62 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU2-35P-201ENST00000516446 142 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
HLA-DRAP01903 RNU2-4P-201ENST00000606190 192 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.5□□□□□ -2.65
HLA-DRAP01903 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 MIR216B-201ENST00000390186 82 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 RNU6-850P-201ENST00000516934 103 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 RNY1P9-201ENST00000532431 109 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 AC145423.2-201ENST00000610631 239 ntBASIC-1.51□□□□□ -2.65
HLA-DRAP01903 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 RNU6-103P-201ENST00000363686 107 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 SNORA49-201ENST00000386157 136 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 RNU6-381P-201ENST00000391259 108 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 MIR3115-201ENST00000577915 68 ntBASIC-1.52□□□□□ -2.65
HLA-DRAP01903 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR516A2-201ENST00000384888 90 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR516A1-201ENST00000385033 90 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 MIR517B-201ENST00000385102 67 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 RNU6-876P-201ENST00000391295 104 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 AL121914.1-201ENST00000450188 156 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SERF1AP1-201ENST00000514575 187 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 SNORA40.15-201ENST00000516884 107 ntBASIC-1.53□□□□□ -2.65
HLA-DRAP01903 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 MT-TL1-201ENST00000386347 75 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 RNU6-121P-201ENST00000410525 99 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 AP000533.3-201ENST00000447704 118 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.54□□□□□ -2.66
HLA-DRAP01903 MIR376B-201ENST00000614515 100 ntBASIC-1.54□□□□□ -2.66
HLA-DRAP01903 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 RNU6-277P-201ENST00000516272 106 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 AC009779.6-201ENST00000603972 165 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 MIR6854-201ENST00000614935 69 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 TRDV1-202ENST00000621643 102 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 MIR1302-1-201ENST00000637932 143 ntBASIC-1.55□□□□□ -2.66
HLA-DRAP01903 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 RNU4-32P-201ENST00000363404 141 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC140658.3-201ENST00000567603 271 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC021443.1-201ENST00000604478 211 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC087741.2-201ENST00000619415 172 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 AC073869.6-201ENST00000640656 341 ntBASIC-1.56□□□□□ -2.66
HLA-DRAP01903 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU4-17P-201ENST00000365598 141 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 SNORD38.2-201ENST00000384470 69 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 RNU7-164P-201ENST00000459221 62 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 AC138907.4-201ENST00000570107 226 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 MIR4306-201ENST00000583390 91 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.57□□□□□ -2.66
HLA-DRAP01903 SNORD27-201ENST00000363981 72 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SNORD115-35-201ENST00000365122 82 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 RNU6-243P-201ENST00000391140 107 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 MIR1252-201ENST00000408861 65 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SNORD2.1-201ENST00000458762 69 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 SCARNA18B-201ENST00000458806 135 ntBASIC-1.58□□□□□ -2.66
HLA-DRAP01903 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 FGF7P6-202ENST00000451282 293 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 SNORD19B-201ENST00000459623 84 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 RNA5SP236-201ENST00000516169 116 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 MIR5704-201ENST00000584029 77 ntBASIC-1.59□□□□□ -2.66
HLA-DRAP01903 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 AL365265.1-201ENST00000621045 234 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 U6.100-201ENST00000636230 99 ntBASIC-1.6□□□□□ -2.67
HLA-DRAP01903 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 RNU6-770P-201ENST00000363929 105 ntBASIC-1.61□□□□□ -2.67
HLA-DRAP01903 RNU6-101P-201ENST00000410323 104 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms