Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU7-113P-201ENST00000459273 62 ntBASIC-1.7□□□□□ -2.68
TNFP01375 RNA5SP401-201ENST00000515920 127 ntBASIC-1.7□□□□□ -2.68
TNFP01375 MIR3145-201ENST00000580727 82 ntBASIC-1.7□□□□□ -2.68
TNFP01375 MIR3140-201ENST00000583685 90 ntBASIC-1.7□□□□□ -2.68
TNFP01375 RNU2-4P-201ENST00000606190 192 ntBASIC-1.7□□□□□ -2.68
TNFP01375 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.71□□□□□ -2.68
TNFP01375 RNU6-978P-201ENST00000364371 103 ntBASIC-1.71□□□□□ -2.68
TNFP01375 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.71□□□□□ -2.68
TNFP01375 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.71□□□□□ -2.68
TNFP01375 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.71□□□□□ -2.68
TNFP01375 SNORA72.4-201ENST00000384174 132 ntBASIC-1.71□□□□□ -2.68
TNFP01375 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.71□□□□□ -2.68
TNFP01375 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.71□□□□□ -2.68
TNFP01375 AL353193.1-201ENST00000421444 268 ntBASIC-1.71□□□□□ -2.68
TNFP01375 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.71□□□□□ -2.68
TNFP01375 SNORD42A-201ENST00000459584 64 ntBASIC-1.71□□□□□ -2.68
TNFP01375 MTCO2P24-201ENST00000515611 426 ntBASIC-1.71□□□□□ -2.68
TNFP01375 RNU7-154P-201ENST00000516194 62 ntBASIC-1.71□□□□□ -2.68
TNFP01375 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.71□□□□□ -2.68
TNFP01375 AC005014.2-201ENST00000607795 599 ntBASIC-1.71□□□□□ -2.68
TNFP01375 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.72□□□□□ -2.68
TNFP01375 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.72□□□□□ -2.68
TNFP01375 RNU6-842P-201ENST00000384269 107 ntBASIC-1.72□□□□□ -2.68
TNFP01375 RNU7-80P-201ENST00000459562 61 ntBASIC-1.72□□□□□ -2.68
TNFP01375 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.72□□□□□ -2.68
TNFP01375 RNA5SP147-201ENST00000516493 109 ntBASIC-1.72□□□□□ -2.68
TNFP01375 MIR2355-201ENST00000517199 87 ntBASIC-1.72□□□□□ -2.68
TNFP01375 MRPS36P3-201ENST00000519284 130 ntBASIC-1.72□□□□□ -2.68
TNFP01375 AC005520.4-201ENST00000604337 90 ntBASIC-1.72□□□□□ -2.68
TNFP01375 AL157392.4-201ENST00000609756 345 ntBASIC-1.72□□□□□ -2.68
TNFP01375 PISRT1.1-201ENST00000616930 107 ntBASIC-1.72□□□□□ -2.68
TNFP01375 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
TNFP01375 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.73□□□□□ -2.69
TNFP01375 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.73□□□□□ -2.69
TNFP01375 SNORD90-201ENST00000391145 111 ntBASIC-1.73□□□□□ -2.69
TNFP01375 RNY4-201ENST00000516507 96 ntBASIC-1.73□□□□□ -2.69
TNFP01375 MIR3129-201ENST00000581095 76 ntBASIC-1.73□□□□□ -2.69
TNFP01375 AL132765.2-201ENST00000610812 351 ntBASIC-1.73□□□□□ -2.69
TNFP01375 FTX_4.1-201ENST00000616291 147 ntBASIC-1.73□□□□□ -2.69
TNFP01375 RNU6-626P-201ENST00000363354 107 ntBASIC-1.74□□□□□ -2.69
TNFP01375 SNORD27-201ENST00000363981 72 ntBASIC-1.74□□□□□ -2.69
TNFP01375 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.74□□□□□ -2.69
TNFP01375 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.74□□□□□ -2.69
TNFP01375 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.74□□□□□ -2.69
TNFP01375 MIR216B-201ENST00000390186 82 ntBASIC-1.74□□□□□ -2.69
TNFP01375 SNORD37.1-201ENST00000390968 65 ntBASIC-1.74□□□□□ -2.69
TNFP01375 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.74□□□□□ -2.69
TNFP01375 AL035461.1-201ENST00000421490 332 ntBASIC-1.74□□□□□ -2.69
TNFP01375 RBMX2P4-201ENST00000441256 376 ntBASIC-1.74□□□□□ -2.69
TNFP01375 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.74□□□□□ -2.69
TNFP01375 MRPS35P2-201ENST00000508242 191 ntBASIC-1.74□□□□□ -2.69
TNFP01375 RNU7-2P-201ENST00000516096 62 ntBASIC-1.74□□□□□ -2.69
TNFP01375 MIR3913-1-201ENST00000577744 102 ntBASIC-1.74□□□□□ -2.69
TNFP01375 MIR4662B-201ENST00000579498 81 ntBASIC-1.74□□□□□ -2.69
TNFP01375 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.74□□□□□ -2.69
TNFP01375 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.74□□□□□ -2.69
TNFP01375 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.75□□□□□ -2.69
TNFP01375 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.75□□□□□ -2.69
TNFP01375 RNU6-824P-201ENST00000363724 104 ntBASIC-1.75□□□□□ -2.69
TNFP01375 RNU6-682P-201ENST00000363843 106 ntBASIC-1.75□□□□□ -2.69
TNFP01375 RNU4-70P-201ENST00000384579 139 ntBASIC-1.75□□□□□ -2.69
TNFP01375 MIR581-201ENST00000384895 96 ntBASIC-1.75□□□□□ -2.69
TNFP01375 MIR548Q-201ENST00000408404 100 ntBASIC-1.75□□□□□ -2.69
TNFP01375 AC138393.2-201ENST00000414742 246 ntBASIC-1.75□□□□□ -2.69
TNFP01375 MTCO2P19-201ENST00000427513 598 ntBASIC-1.75□□□□□ -2.69
TNFP01375 MTATP6P21-201ENST00000440681 189 ntBASIC-1.75□□□□□ -2.69
TNFP01375 RNU6-365P-201ENST00000517113 106 ntBASIC-1.75□□□□□ -2.69
TNFP01375 MIR3942-201ENST00000585264 109 ntBASIC-1.75□□□□□ -2.69
TNFP01375 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.75□□□□□ -2.69
TNFP01375 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.76□□□□□ -2.69
TNFP01375 RNU6-151P-201ENST00000364158 107 ntBASIC-1.76□□□□□ -2.69
TNFP01375 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.76□□□□□ -2.69
TNFP01375 RNU6-906P-201ENST00000384700 70 ntBASIC-1.76□□□□□ -2.69
TNFP01375 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.76□□□□□ -2.69
TNFP01375 MIR548A1-201ENST00000385041 97 ntBASIC-1.76□□□□□ -2.69
TNFP01375 U3.27-201ENST00000391237 200 ntBASIC-1.76□□□□□ -2.69
TNFP01375 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.76□□□□□ -2.69
TNFP01375 RNU7-66P-201ENST00000459469 62 ntBASIC-1.76□□□□□ -2.69
TNFP01375 RNU6-261P-201ENST00000459506 102 ntBASIC-1.76□□□□□ -2.69
TNFP01375 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.76□□□□□ -2.69
TNFP01375 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.77□□□□□ -2.69
TNFP01375 RNU6-616P-201ENST00000384353 107 ntBASIC-1.77□□□□□ -2.69
TNFP01375 MIR203A-201ENST00000384836 110 ntBASIC-1.77□□□□□ -2.69
TNFP01375 RNU6-243P-201ENST00000391140 107 ntBASIC-1.77□□□□□ -2.69
TNFP01375 FGF7P7-201ENST00000514120 227 ntBASIC-1.77□□□□□ -2.69
TNFP01375 RNU6-518P-201ENST00000516056 96 ntBASIC-1.77□□□□□ -2.69
TNFP01375 VN1R91P-201ENST00000594377 169 ntBASIC-1.77□□□□□ -2.69
TNFP01375 AC021443.1-201ENST00000604478 211 ntBASIC-1.77□□□□□ -2.69
TNFP01375 MTND5P26-201ENST00000426018 1752 ntBASIC-1.77□□□□□ -2.69
TNFP01375 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.78□□□□□ -2.69
TNFP01375 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.78□□□□□ -2.69
TNFP01375 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.78□□□□□ -2.69
TNFP01375 RNU7-24P-201ENST00000458867 62 ntBASIC-1.78□□□□□ -2.69
TNFP01375 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.78□□□□□ -2.69
TNFP01375 RPS29P25-201ENST00000481709 171 ntBASIC-1.78□□□□□ -2.69
TNFP01375 RNU6-864P-201ENST00000516256 108 ntBASIC-1.78□□□□□ -2.69
TNFP01375 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.78□□□□□ -2.69
TNFP01375 MIR3672-201ENST00000584290 82 ntBASIC-1.78□□□□□ -2.69
TNFP01375 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.78□□□□□ -2.69
TNFP01375 UBE2WP1-201ENST00000362030 340 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 291.9 ms