Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU7-2P-201ENST00000516096 62 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 RNA5SP66-201ENST00000517178 101 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 AL160413.1-201ENST00000622780 310 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 MIR539-201ENST00000365690 78 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 RNU6-154P-201ENST00000384306 106 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 MIR617-201ENST00000385030 97 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 SNORD77B-201ENST00000391112 67 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 AC022028.1-201ENST00000412054 408 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 MIR4460-201ENST00000577862 86 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 MIR3681-201ENST00000580089 72 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 MIR376B-201ENST00000614515 100 ntBASIC-0.83□□□□□ -2.54
UPK1BO75841 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 RNU6-713P-201ENST00000384761 107 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 MIR7-2-201ENST00000384970 110 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 MIR548P-201ENST00000408336 84 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 AC011603.4-201ENST00000611325 277 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 AC134503.1-201ENST00000633048 54 ntBASIC-0.84□□□□□ -2.54
UPK1BO75841 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 RNU6-571P-201ENST00000384128 107 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 RNU6-616P-201ENST00000384353 107 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 MIR224-201ENST00000384889 81 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 SNORA3B-201ENST00000391305 131 ntBASIC-0.85□□□□□ -2.55
UPK1BO75841 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.85□□□□□ -2.55
UPK1BO75841 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 SNORA51.5-201ENST00000384126 131 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MIR604-201ENST00000384880 94 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MIR516A2-201ENST00000384888 90 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MIR516A1-201ENST00000385033 90 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MT-TW-201ENST00000387382 68 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MIR2113-201ENST00000459007 91 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 RNU6-850P-201ENST00000516934 103 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 MIR3171-201ENST00000584270 74 ntBASIC-0.86□□□□□ -2.55
UPK1BO75841 SNORD114-14-201ENST00000362723 75 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 RNU6-985P-201ENST00000410182 104 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 MIR4636-201ENST00000582271 80 ntBASIC-0.87□□□□□ -2.55
UPK1BO75841 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 SNORD115-35-201ENST00000365122 82 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 SNORD115-44-201ENST00000365391 82 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 RNU6-47P-201ENST00000383866 107 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 RNU6-472P-201ENST00000384299 107 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 RNU6-768P-201ENST00000384683 107 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 MT-TQ-201ENST00000387372 72 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 AL445193.1-201ENST00000441183 141 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 AC074198.2-201ENST00000508153 258 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 RNA5SP169-201ENST00000517268 117 ntBASIC-0.88□□□□□ -2.55
UPK1BO75841 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 RNU6-275P-201ENST00000364910 107 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 RNU4-63P-201ENST00000411313 118 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 RNU6-287P-201ENST00000516230 98 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 AP001328.1-201ENST00000528550 176 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 MIR4308-201ENST00000580634 81 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 AC087741.2-201ENST00000619415 172 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 AC093726.3-201ENST00000637588 150 ntBASIC-0.89□□□□□ -2.55
UPK1BO75841 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 MIR34C-201ENST00000384831 77 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 MIR9-2-201ENST00000384838 87 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 MT-TY-201ENST00000387409 66 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 MIR196A1-201ENST00000388006 70 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 MIR1302-6-201ENST00000408466 90 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 AP000676.1-201ENST00000533307 52 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 AC020661.2-201ENST00000560114 134 ntBASIC-0.9□□□□□ -2.55
UPK1BO75841 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNU6-508P-201ENST00000363231 103 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNU6-238P-201ENST00000363313 106 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNU6-818P-201ENST00000364837 108 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNY1P7-201ENST00000384743 110 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.91□□□□□ -2.56
UPK1BO75841 MTATP6P21-201ENST00000440681 189 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 MTND1P19-201ENST00000511780 315 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 U6.106-201ENST00000636360 105 ntBASIC-0.91□□□□□ -2.56
UPK1BO75841 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.92□□□□□ -2.56
UPK1BO75841 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.92□□□□□ -2.56
UPK1BO75841 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.92□□□□□ -2.56
UPK1BO75841 RNU6-635P-201ENST00000516651 102 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms