Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS4BO75351 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNY3P2-201ENST00000362918 102 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 Y_RNA.81-201ENST00000362997 102 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-1099P-201ENST00000363533 107 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-865P-201ENST00000364772 107 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-554P-201ENST00000410466 106 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC067940.1-201ENST00000458411 300 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 HSBP1P2-201ENST00000299671 229 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 RNA5SP133-201ENST00000363368 119 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 MIR938-201ENST00000401216 83 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 RNU4-83P-201ENST00000410863 133 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 PDCD5P2-201ENST00000507570 312 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 MIR6082-201ENST00000613604 109 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 Y_RNA.119-201ENST00000363301 96 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU6-832P-201ENST00000363319 107 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 Y_RNA.374-201ENST00000365606 101 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS4BO75351 MIR1302-5-201ENST00000408164 150 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU6-537P-201ENST00000517277 103 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 AL136317.1-201ENST00000612653 226 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 AL442128.1-201ENST00000615151 90 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 U6.109-201ENST00000636749 87 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 SNORD38.1-201ENST00000363863 68 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 MIR100-201ENST00000385259 80 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNU6-904P-201ENST00000516206 101 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNA5SP255-201ENST00000516370 107 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNU6-977P-201ENST00000516411 103 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 SNORA25.16-201ENST00000516741 121 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RN7SL793P-201ENST00000583259 296 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 AL512310.12-203ENST00000640543 90 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 RNY1P4-201ENST00000384595 115 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 MIR3613-201ENST00000579844 87 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 SNORA63.4-201ENST00000362763 126 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU4-58P-201ENST00000363192 141 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 Y_RNA.247-201ENST00000364500 92 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 MIR216A-201ENST00000385063 110 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU6-531P-201ENST00000516694 104 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS4BO75351 RNU6-766P-201ENST00000362478 107 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 RNU6-403P-201ENST00000363163 104 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 SNORD89-201ENST00000390981 114 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AP003327.1-201ENST00000529684 127 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC141557.1-201ENST00000540982 400 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC008608.1-201ENST00000603910 127 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS4BO75351 RNU6-1113P-201ENST00000384348 107 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 RNU6-364P-201ENST00000384387 107 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNORD38.2-201ENST00000384470 69 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 Y_RNA.601-201ENST00000410500 113 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNRPGP12-201ENST00000449481 213 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AL031737.1-201ENST00000450125 223 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 DEFB131E-201ENST00000532329 154 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC090897.1-201ENST00000580909 226 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 Y_RNA.10-201ENST00000362371 110 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 RNU4-36P-201ENST00000364294 144 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 MIR520F-201ENST00000384824 87 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 SNORA19.1-201ENST00000410656 129 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS4BO75351 Y_RNA.173-201ENST00000363776 113 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-153P-201ENST00000364422 104 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-147P-201ENST00000383983 107 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-756P-201ENST00000383997 107 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 SNORA51.5-201ENST00000384126 131 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 SNORA72.6-201ENST00000384520 129 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 MIR4500-201ENST00000579472 76 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 MIR4439-201ENST00000583746 80 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS4BO75351 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 AC096720.1-201ENST00000604441 183 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 Y_RNA.818-201ENST00000618813 71 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-1335P-201ENST00000365426 107 ntBASIC1□□□□□ -2.25
VPS4BO75351 RNU6-571P-201ENST00000384128 107 ntBASIC1□□□□□ -2.25
VPS4BO75351 MIR590-201ENST00000385008 97 ntBASIC1□□□□□ -2.25
VPS4BO75351 MIR548G-201ENST00000408442 89 ntBASIC1□□□□□ -2.25
VPS4BO75351 RNU6-90P-201ENST00000606352 106 ntBASIC1□□□□□ -2.25
VPS4BO75351 Y_RNA.56-201ENST00000362798 112 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 SCARNA23-201ENST00000516060 130 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 RNU6-448P-201ENST00000517052 107 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms