Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS4BO75351 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNY3P2-201ENST00000362918 102 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 Y_RNA.81-201ENST00000362997 102 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-1099P-201ENST00000363533 107 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-865P-201ENST00000364772 107 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-554P-201ENST00000410466 106 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 AC067940.1-201ENST00000458411 300 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
VPS4BO75351 HSBP1P2-201ENST00000299671 229 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 RNA5SP133-201ENST00000363368 119 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 MIR938-201ENST00000401216 83 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 RNU4-83P-201ENST00000410863 133 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 PDCD5P2-201ENST00000507570 312 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 MIR6082-201ENST00000613604 109 ntBASIC1.09□□□□□ -2.23
VPS4BO75351 Y_RNA.119-201ENST00000363301 96 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU6-832P-201ENST00000363319 107 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 Y_RNA.374-201ENST00000365606 101 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS4BO75351 MIR1302-5-201ENST00000408164 150 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 RNU6-537P-201ENST00000517277 103 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 AL136317.1-201ENST00000612653 226 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 AL442128.1-201ENST00000615151 90 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 U6.109-201ENST00000636749 87 ntBASIC1.08□□□□□ -2.24
VPS4BO75351 SNORD38.1-201ENST00000363863 68 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 MIR100-201ENST00000385259 80 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNU6-904P-201ENST00000516206 101 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNA5SP255-201ENST00000516370 107 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RNU6-977P-201ENST00000516411 103 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 SNORA25.16-201ENST00000516741 121 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 RN7SL793P-201ENST00000583259 296 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 AL512310.12-203ENST00000640543 90 ntBASIC1.07□□□□□ -2.24
VPS4BO75351 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 RNY1P4-201ENST00000384595 115 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 MIR3613-201ENST00000579844 87 ntBASIC1.06□□□□□ -2.24
VPS4BO75351 SNORA63.4-201ENST00000362763 126 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU4-58P-201ENST00000363192 141 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 Y_RNA.247-201ENST00000364500 92 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 MIR216A-201ENST00000385063 110 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 RNU6-531P-201ENST00000516694 104 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
VPS4BO75351 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS4BO75351 RNU6-766P-201ENST00000362478 107 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 RNU6-403P-201ENST00000363163 104 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 SNORD89-201ENST00000390981 114 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AP003327.1-201ENST00000529684 127 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC141557.1-201ENST00000540982 400 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC008608.1-201ENST00000603910 127 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
VPS4BO75351 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS4BO75351 RNU6-1113P-201ENST00000384348 107 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 RNU6-364P-201ENST00000384387 107 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNORD38.2-201ENST00000384470 69 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 Y_RNA.601-201ENST00000410500 113 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 SNRPGP12-201ENST00000449481 213 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AL031737.1-201ENST00000450125 223 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 DEFB131E-201ENST00000532329 154 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC090897.1-201ENST00000580909 226 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
VPS4BO75351 Y_RNA.10-201ENST00000362371 110 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 RNU4-36P-201ENST00000364294 144 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 MIR520F-201ENST00000384824 87 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 SNORA19.1-201ENST00000410656 129 ntBASIC1.02□□□□□ -2.25
VPS4BO75351 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS4BO75351 Y_RNA.173-201ENST00000363776 113 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-153P-201ENST00000364422 104 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-147P-201ENST00000383983 107 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-756P-201ENST00000383997 107 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 SNORA51.5-201ENST00000384126 131 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 SNORA72.6-201ENST00000384520 129 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 MIR4500-201ENST00000579472 76 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 MIR4439-201ENST00000583746 80 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS4BO75351 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 AC096720.1-201ENST00000604441 183 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 Y_RNA.818-201ENST00000618813 71 ntBASIC1.01□□□□□ -2.25
VPS4BO75351 RNU6-1335P-201ENST00000365426 107 ntBASIC1□□□□□ -2.25
VPS4BO75351 RNU6-571P-201ENST00000384128 107 ntBASIC1□□□□□ -2.25
VPS4BO75351 MIR590-201ENST00000385008 97 ntBASIC1□□□□□ -2.25
VPS4BO75351 MIR548G-201ENST00000408442 89 ntBASIC1□□□□□ -2.25
VPS4BO75351 RNU6-90P-201ENST00000606352 106 ntBASIC1□□□□□ -2.25
VPS4BO75351 Y_RNA.56-201ENST00000362798 112 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 SCARNA23-201ENST00000516060 130 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 RNU6-448P-201ENST00000517052 107 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
VPS4BO75351 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms